Aeromicrobium wangtongii: NQV15_17920
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Entry
NQV15_17920 CDS
T09548
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
awn
Aeromicrobium wangtongii
Brite
KEGG Orthology (KO) [BR:
awn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
awn03019
]
NQV15_17920 (hrpB)
Enzymes [BR:
awn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NQV15_17920 (hrpB)
Messenger RNA biogenesis [BR:
awn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NQV15_17920 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
AAA_30
HA2_N
AAA_19
AAA_11
DUF3638
Helicase_RecD
ParA
RoxA-like_Cyt-c
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
UUP13702
LinkDB
All DBs
Position
complement(3653892..3656414)
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AA seq
840 aa
AA seq
DB search
MPPDLIRRLLENPPDLPVRSGLPALEIALREQGVAVMQAPPGTGKTTLVPPAVAAMVAGG
GRVVVTQPRRIAARAAARRLASLLGERVGQTVGHTVRGDRAVGPDTRIEFVTTGVLLRRL
QRDPELPGVAAVVLDEVHERQLDADLALAFLVDVRATVRDDLLLVAMSATVEAERTAATL
AASTTGPVPVVDVPGALHPVTTHWAPPPPGVLPTDERGVPPRFLDHVAATVRHAVSTDPG
DVLVFVPGVGEVDGVMRRLSGLGDVDVLALHGRLPAQEQDRALTQGARRRIVVSTAVAES
SLTVPGVRIVVDAGLSREPRTDQVRGLPALVTVRVSRSAAEQRAGRAGREAPGVVHRCWS
RADHAHLPAHPAPEIAVADLTGFCLELAAWGDVDGASLALLDPPPPPALETARQTLVGLG
AIDATGAITDRGRAMAQVPADPRLARALLDGAEAVGAHRAAEVVALLDDDVRAPGGDLVA
ALRGVRRGGPAARSWAEAVARLESLLPTRTSRTGLTDDLAVGTVVALAHPGRIARRRSGG
GSYLMVSGTGAAFRAADPSLAGLPWIAIADAERRPGARDATIRSAAPITEDIALDAASGV
WQEADEVTWAGGRIVARRVTRLGAIELSAVPLADPPPDAVAAAVADGLSREGLAMLPWSE
AAVALRRRMAFLHDALGEPWPDVGDEALLTRIDAWLGADLARVRGSRDLGRIDVLSALRR
LLPWPAAGRLDELAPERVTLPNGKGARVEYGATGTEQPVLSVRLQDAFGWTATPRIADGR
VPLLLHLLTPARRPAAVTADLESFWAGPYRQVRAELRGRYPKHAWPEDPTQAQATGARRT
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcccgacctgatccggcgactgctggagaaccctcccgatctaccggtccggtcc
gggctgcccgcgctggagatcgctctgcgcgagcagggcgtcgccgtgatgcaggctcca
ccgggcaccggcaagacgacgctggtgccgccggcggtggccgcgatggtcgccggcggc
ggccgggtggtggtgacccagccgcgccgcatcgcggcccgtgccgcggcccggcggctc
gcaagcctgctgggtgagcgggtcggccagaccgtgggccacaccgtgcgcggtgaccgg
gcggtcgggccggacacccggatcgagttcgtgaccaccggggtgctgctgcgccggctc
cagcgcgatccggagctgccgggcgtcgcggcggtcgtcctggacgaggtgcacgagcgg
cagctcgacgcggacctggcgctggccttcctggtcgacgtccgcgcgacggtgcgcgac
gacctgctgctggtcgcgatgtcggcgaccgtcgaggccgagcgcacggccgcgacgctg
gctgcctcgacgaccggtccggtccccgtcgtcgacgtgcccggagccctgcaccccgtc
acgacgcactgggcccccccgccgccgggcgtcctgccgaccgacgagcgcggcgtgccg
ccacgcttcctggaccacgtggccgccacggtccgccacgccgtctccaccgaccccggt
gacgtgctggtgttcgtgccgggcgtcggcgaggtggacggggtcatgcgccggctctcc
gggctgggcgacgtcgacgtgctggcgctgcacggccggctccccgcccaggagcaggac
cgggctctcacccagggagcgcgtcgccggatcgtggtgtcgaccgcggtcgccgagtcg
tccctgacggtgccgggcgtgcgcatcgtggtcgacgccggactgtcccgcgagccgcgc
accgaccaggttcgcgggctgcccgcgctcgtgacggtgcgggtgagccgatccgcggcc
gagcagcgggccggccgcgcggggcgtgaggcacccggcgtcgtgcaccggtgctggtcg
cgcgccgatcacgcccacctgcccgcgcacccggcgccggagatcgccgtcgccgacctg
accggcttctgcctcgagctcgccgcgtggggcgatgtcgacggtgcgagcctggccctg
ctcgacccaccgccgccgcccgcgctcgagacggcccgccagaccctggtcggcctcggc
gcgatcgacgccaccggcgccatcacggaccgcggccgcgcgatggcccaggtcccggcc
gatccccggctggcccgcgccctgctcgacggggccgaggccgtcggtgcacatcgggcg
gccgaggtcgtcgcgctgctggacgatgacgtccgcgcgcccggcggcgacctggtcgcg
gcgctgcgtggcgtgcggcgtggcggaccggcggcccggtcgtgggccgaggccgtcgca
cggctggagtcgctgctgccgacgcgcacgtcccggaccgggctgaccgacgatctcgcg
gtcggcaccgtcgtggccctggcgcaccccggacgcatcgcgcgccgacgctccggtggc
gggtcgtacctcatggtgtccggcaccggggcggccttccgcgctgccgacccgtcgctc
gcagggctgccgtggatcgcgatcgccgatgccgagcggcgtcccggcgcgcgggacgcc
acgatccggtcggcggcgcccatcaccgaggacatcgcgctcgatgcggcgtccggcgtg
tggcaggaggccgacgaggtcacctgggccggcggccggatcgtggcccgccgggtcacc
cggctcggggcgatcgagctgtcggccgtcccgttggccgatccgccgccggacgcggtc
gcggcggcggtcgccgacggcttgtcccgcgagggccttgcgatgctgccgtggagcgag
gctgcggtcgcgctgcgccgccggatggccttcctgcacgacgcgctcggcgagccgtgg
cccgatgtcggagacgaggcgctgctgacccgcatcgatgcctggctcggtgccgatctc
gcccgcgtgcggggcagccgcgacctgggccgcatcgacgtcctgtcggcgctacgccgg
ttgctgccgtggcccgcggccggacgcctcgacgagctggcccccgagagggtcacgctg
ccgaacggcaagggcgcccgggtcgagtacggggcgacgggcaccgagcagccggtgctg
tcggtgcggctgcaggacgccttcgggtggaccgcgacgccccgcatcgcggacgggcgg
gtgccgctgctgctgcacctgctgaccccggcccgccggcccgctgcggtcaccgccgac
ctggagtcgttctgggccgggccgtaccggcaggtgcgcgccgagctgcgcggccgctat
cccaagcacgcctggccggaggacccgacgcaggctcaggccacgggcgcgcggcgcacc
tga
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