Acetobacterium woodii: Awo_c02960
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Entry
Awo_c02960 CDS
T01732
Symbol
pcrA1
Name
(GenBank) ATP-dependent DNA helicase PcrA1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
awo
Acetobacterium woodii
Pathway
awo03420
Nucleotide excision repair
awo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
awo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Awo_c02960 (pcrA1)
03430 Mismatch repair
Awo_c02960 (pcrA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
awo03400
]
Awo_c02960 (pcrA1)
Enzymes [BR:
awo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Awo_c02960 (pcrA1)
DNA repair and recombination proteins [BR:
awo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Awo_c02960 (pcrA1)
MMR (mismatch excision repair)
Other MMR factors
Awo_c02960 (pcrA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
Tudor_1_RapA
GHL6
Hormone_recep
Motif
Other DBs
NCBI-ProteinID:
AFA47105
UniProt:
H6LGG9
LinkDB
All DBs
Position
343221..345428
Genome browser
AA seq
735 aa
AA seq
DB search
MSLLDGLNSRQREAAETTEGPLLILAGAGSGKTRTIIHRIAHIIETERAWPSQILAITFT
NKAAGEMRERIAKMNIQDSKRIWMATFHAMCARIMRTHSQWLGYDDNFVIYDTDDQKRLY
KSLIKELGLNDKYFTSQFLGGEISTAKNNFISPEAYSKENSGDFRKEKVGIYYKRYQESL
KANNAMDFDDLIYNTLVLFKGFPEILEQYQNRFKYIMVDEYQDTNHSQYELVNMLAAKNK
NICVCGDDDQSIYGWRGADISNILDFEKDYTNAKVVKLEENYRSTQTILDCANGVIVRNT
GRKEKALWTNNAGDEKIMISSFNQGYDEARFVVDEINDNIAKGNGIYGDFAILYRTNAQS
RLFEEALMRAGLPYQLIGGTGFYSRVEIKDTIAYLNVLSNPKDNMGFMRIVNVPKRGIGS
ATIEKIAEYANFKSFSLMEAFHHVEEIPELSPSVKNKVRAFSELMKTLEKIQETANLSEL
IAAVIEKTGYLNMLETGKMDKGESRLENLQELLSSAADFEKNSDDQSLSAYLETVALSSE
TDKYDGDEGKVLLMTLHNAKGLEFPIVFIPGLEEGIFPHGRALDSPEDIEEERRICYVGI
TRAMKRLYLSWAAERTLYGRRQIQSPSRFLKEMPDEVCVENKQRYERKPEIDVETKKNKT
FSERVTQSKVAIRRNNSHAVNHHINQVENTFGLTDKVKHKKFGIGTVVEVKNNMISVAFP
GVGIKKMDPTFVEKA
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgagtttattagacggtttaaacagtcggcaacgggaagcagcagaaaccacagaagga
ccattattaatcctggcgggagccggatcaggaaaaacacgaaccattatccatcgaatt
gcccatatcattgaaacggaacgggcctggccatcacaaatcctggccattacctttact
aataaagccgccggggaaatgcgggaacgtattgccaaaatgaacattcaggacagtaag
cggatttggatggcaacatttcacgccatgtgcgcacgaatcatgcgaacgcatagccaa
tggttaggttacgacgataattttgttatttatgacacggatgaccagaaacgtttatat
aaaagtttgatcaaagaattaggattgaatgataaatactttaccagccaatttttaggc
ggggaaatttccacggccaaaaataactttatcagtcccgaagcttacagcaaagaaaat
agcggtgattttagaaaagaaaaggtcggcatttattataaacgctaccaggaaagttta
aaggcaaataatgccatggattttgatgaccttatctataataccctggttttatttaaa
ggttttccggaaattttggaacaatatcaaaatcgttttaaatatattatggttgatgaa
tatcaagataccaaccatagccaatatgaactggttaatatgctggcggctaaaaataaa
aatatttgtgtctgcggtgatgatgatcagagtatttacggatggcggggcgctgatatc
agcaatatccttgattttgaaaaagattataccaatgccaaggttgtcaaattggaagaa
aattaccgttccacccagaccattttggattgtgccaatggcgtaatcgtcagaaatacc
ggtcgtaaagaaaaggccttatggacgaacaatgctggtgacgaaaagatcatgatctca
tcatttaaccagggttatgatgaggcccgcttcgttgttgatgaaattaacgacaatatt
gccaaaggaaatggcatttatggtgattttgcgattctttatcggacaaatgcccagtcc
cgattattcgaagaagcgctgatgcgggccgggttgccttatcagttaatcgggggaacc
gggttttattcacgggtcgaaattaaagataccatcgcatatttaaatgtgcttagcaat
cccaaagataatatgggctttatgcgaattgtcaatgttcccaagcgggggattggatcg
gcaaccattgaaaaaatagccgagtacgctaattttaaaagttttagtttaatggaggca
tttcatcatgtcgaagaaattccagagttaagccccagtgtcaaaaataaggttcgagcg
tttagtgagttaatgaaaacactcgaaaagatccaggaaacggcaaatttaagtgaattg
attgcggccgtgattgaaaaaaccggatatcttaatatgctggaaaccggaaaaatggat
aaaggcgaaagccgcttagaaaatctccaggagttattatcttcggcggctgattttgaa
aaaaatagcgatgatcaaagtttgagtgcatatttagaaacggttgctttgtcttcagaa
accgataaatacgatggcgatgaaggaaaagtattgttaatgacgcttcataatgccaag
ggactggaattcccgattgtttttattccgggattggaagaaggaattttcccgcatgga
cgagccctggattcgccagaagatattgaagaggaacggcggatttgttatgttggcatt
acccgggcgatgaaacgtctttatttgtcatgggccgccgaaagaaccctgtatggacgg
cgccagatacaaagcccatcacggtttttaaaagaaatgccggatgaagtttgtgttgaa
aacaagcaacgttacgaacgtaaaccggaaattgatgttgaaacaaagaaaaacaaaacc
ttttcagagcgagtgacgcagtcaaaagtagccattcgtcgaaataattcgcacgcggtt
aatcatcatatcaatcaagttgaaaacacttttgggttaacggacaaagtgaaacataaa
aagtttggaattggcaccgttgttgaagttaaaaataatatgatttcggtggcttttccg
ggggttgggataaagaaaatggaccctacttttgttgaaaaagcctag
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