Acetobacterium woodii: Awo_c20450
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Entry
Awo_c20450 CDS
T01732
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
awo
Acetobacterium woodii
Pathway
awo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
awo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Awo_c20450 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
awo03019
]
Awo_c20450 (rhlE)
Enzymes [BR:
awo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Awo_c20450 (rhlE)
Messenger RNA biogenesis [BR:
awo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Awo_c20450 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
AFA48823
UniProt:
H6LKN1
LinkDB
All DBs
Position
complement(2419583..2420875)
Genome browser
AA seq
430 aa
AA seq
DB search
MQFENLNIIQPIQKALKAEGYTEATPIQEKAIPSLLEGKDLLGCAQTGTGKTAAFAIPIL
QGLSYEQRNLKGNRPIKALVLAPTRELALQISDSFKAYGKYLGLKTLVIYGGVSQNAQTK
ALSSGVDILVATPGRLLDLINQKYIKLNQIKSFVLDEADMMLDMGMLQDVRKIIKHMPVE
RQNMLFSATMPQEIAKLSGSILKNPTKVTITPVSSAVEIIEQNVYYVNKNNKINLLIHLL
KNKEIVSALVFSRTKHGADKIVKHLERAGFKAQAIHGNKSQNARQLALNNFKERKTRILV
ATDIAARGIDIEELSHVFNYDLPEVPETYVHRIGRTGRAGLGGIAIAFCDQEEMPLLKSI
EKLVSKSIPVVEVHPFPLVQVSSELLATSSRRSNDYQSRNSKNTRSNGKSGGGKKDRDRF
YSKNKKKDSK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
ttgcaatttgaaaatttaaatattatccagcctattcagaaggctttaaaagctgaaggt
tacactgaggcaacaccaattcaagaaaaggctattccttctttgctggaaggtaaagat
ttgttgggatgtgcccaaactggaactgggaaaactgccgcatttgccatccccatttta
caggggctttcctatgagcagcgaaatctaaagggaaacagaccgatcaaagcattggta
ttggcaccaactcgggaacttgcgcttcaaatcagtgatagttttaaagcttatggtaaa
tatttaggtttgaaaactttagttatttatggtggcgtttcacaaaatgctcagacaaaa
gcgctttcaagtggggttgatattttggtagcgacaccagggcggttattggatttaatt
aatcaaaagtatattaaacttaatcagataaagtcgtttgttttggatgaagcggatatg
atgcttgatatggggatgttacaagatgttcgtaaaataatcaaacatatgccagttgaa
cggcaaaatatgctgttctcggcaaccatgcctcaagaaattgcaaagttatccggttct
atcttaaaaaatccaacaaaagtaaccattactcctgtatcatcggcagtcgagataatc
gaacaaaatgtatattatgtcaataaaaataataaaattaatttattaattcatttatta
aaaaacaaagaaattgtctcggccttagttttttcgcggacaaaacatggtgctgataaa
attgttaaacatctggaacgggcgggctttaaagcgcaggcaattcatggcaataaatct
caaaatgccagacaactggctttgaataattttaaagaacggaaaacacgaattttagtt
gcgactgacattgcggcgcgtgggattgatattgaagaattgtcacatgtttttaattat
gatttacccgaagtacctgaaacgtacgttcatcggattggccgaaccggtcgtgcggga
cttggcggaattgccattgctttttgtgaccaggaagaaatgccattattaaagagtatt
gaaaaactagtatcaaaatcgattcctgttgtcgaggttcatcccttcccattggtacaa
gtatcctcagaattattggctacatcgtcaagaaggtcaaatgattatcaatctagaaac
tcaaaaaataccaggtcaaatggaaaaagtggtgggggaaaaaaagatcgtgatcgtttt
tattcaaaaaataagaaaaaagatagtaaataa
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