Acetobacterium woodii: Awo_c21810
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Entry
Awo_c21810 CDS
T01732
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
awo
Acetobacterium woodii
Pathway
awo03410
Base excision repair
awo03430
Mismatch repair
awo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
awo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Awo_c21810 (recJ)
03430 Mismatch repair
Awo_c21810 (recJ)
03440 Homologous recombination
Awo_c21810 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
awo03400
]
Awo_c21810 (recJ)
DNA repair and recombination proteins [BR:
awo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Awo_c21810 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Awo_c21810 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Awo_c21810 (recJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AFA48955
UniProt:
H6LC07
LinkDB
All DBs
Position
complement(2568577..2570631)
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AA seq
684 aa
AA seq
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MGKNQYAALQKEIMTKLQLGNRSSEILINRGIQSVEAATRYLNPSLADLHDPFLFEDMEK
VVERILKAQETHEKICLYGDYDADGTTGVAILLNFLQSNGFNVSFFIPNRLITGYGLHQT
PLQTIIDEGITLLITVDNGISANEQIDFCNLNHLDVIVTDHHECHGILPQAYGIINPKVP
GSTYPFKDLCGAGVAFKLVQALSQRLQVEMDIQNAIECVALATVADLVSLQDENRSLVSI
GLNYLNTNPSNLGIRALMTVSDLTELKAWHFGFVLGPKINAAGRLGEANHIVALLTGSDS
VKLMDLAHYLSEENRKRQDLEATILAEALALVENEKLFRDDIIIVVGENWHPGVIGIVAS
RIQEKYFNPVIVISVENNIGKASCRSVEGFSIFAALSSCSDCFTSFGGHDQAAGFSIKTE
NIKEMSVRVKAYGESVGIKKYLVKTYSYDAIIDDAEITWELLNECARFEPCGIGNPGVQL
VLNHPEIKSMGTMGKENNHLRLMLKNDIRGVGFGLGDFNEKFQELPKSVSNTVKMLCRLD
VNDYQGNKTLQVLIKDIKINPIWQIDTAMVLVKTIVQQQNPKAEIDFEAVAINLADLYLD
REIVKKVYLLLKKSNDHGVALDAGDKAQISPFHLLMSCEILREVGLIAYRLKEGLIFSKI
LETKEKKDIQKTKLMIKLVKMISE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
ttggggaaaaatcaatatgctgctttacaaaaagaaattatgacaaaacttcagttagga
aatcgaagctcagaaatactgataaatcggggcatacagtcggttgaagcagctacccgt
tatcttaatccatcactggctgatttacatgatccgtttttgtttgaggacatggaaaaa
gttgttgaacgaattttaaaagcacaagaaacacatgaaaaaatctgtctttatggtgat
tatgacgcggatggaacgacaggggttgcgatattattaaatttcctgcaaagtaatggt
tttaatgtttctttttttattcccaatcgcctgattaccggatatgggttacatcaaact
ccgcttcagacgatcatcgatgaaggtattacgcttttgattaccgttgataatggcatt
tccgccaatgaacaaattgatttttgtaatcttaatcatttggatgtgattgtgacggat
catcacgagtgtcacggtattttaccccaagcttatggtataattaaccctaaagttccg
ggttcaacgtatccgtttaaggatttatgcggcgctggggtggcttttaaattggttcag
gcgctaagccagcggcttcaggtagaaatggacattcagaatgcgattgagtgtgttgct
ttagcgacggtcgctgatttggtttctctgcaagatgaaaataggagtctggtttcaatc
gggctaaattatttaaatacgaatccaagtaacttgggaatccgggcgttaatgacagtt
agtgatttaaccgagttaaaagcctggcattttggttttgtcttaggtccaaagattaat
gcggccggacgtttaggggaagcaaatcatattgttgcgttgttaacgggatcagactcg
gttaagttaatggatttggcccactatctcagtgaggaaaaccgtaaacgacaggatttg
gaggcaacaattctcgcagaagcgttagctttagttgaaaacgaaaaactgtttcgtgat
gatattattatcgtggttggggaaaactggcatcctggggtaattggcatcgtcgcgagt
cgtattcaggagaagtattttaatcctgttattgtgattagtgttgaaaataatatcggc
aaagcatcatgccgcagcgttgaagggtttagtatttttgctgcgttgagttcatgtagt
gactgttttaccagttttggtggtcatgatcaggcggctggttttagtattaaaaccgag
aatatcaaagagatgagcgtccgggtaaaagcttatggcgaatcagtcggcataaaaaaa
tatttggtgaagacttattcatatgatgcaatcatcgatgatgcagaaattacttgggag
ctgttaaatgaatgtgctcgttttgaaccttgcggaattggaaatccgggggtccaactc
gtattaaatcatcccgagataaaatcaatgggaacaatgggaaaggaaaataatcacctt
cggctaatgttgaaaaatgacattcgtggggtggggtttggtttaggtgattttaatgaa
aaatttcaagaattacctaaaagtgtttcaaatacggtaaaaatgttatgtcggttggat
gtaaatgattatcagggaaataaaacgctgcaagtattaatcaaagatatcaaaattaat
ccgatttggcaaatcgacacggcaatggttttagtaaaaacgatcgttcaacaacaaaat
cccaaagcagaaattgatttcgaagcagtggcaataaatttagcagatctttatttagac
cgcgagatcgttaaaaaagtttacctgcttttaaaaaaatcaaatgatcatggagtagcg
ctcgatgctggagataaagcccaaatatcaccgtttcatttattaatgtcatgtgaaata
ttaagagaagttggcttaatcgcctatcggttaaaagaaggattgattttttctaaaata
ttagaaaccaaagaaaaaaaggatattcaaaagacgaaactaatgataaaattagtaaaa
atgattagtgaataa
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