Acetobacterium woodii: Awo_c25450
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Entry
Awo_c25450 CDS
T01732
Symbol
polC2
Name
(GenBank) DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
awo
Acetobacterium woodii
Pathway
awo03030
DNA replication
awo03430
Mismatch repair
awo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
awo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Awo_c25450 (polC2)
03430 Mismatch repair
Awo_c25450 (polC2)
03440 Homologous recombination
Awo_c25450 (polC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
awo03032
]
Awo_c25450 (polC2)
03400 DNA repair and recombination proteins [BR:
awo03400
]
Awo_c25450 (polC2)
Enzymes [BR:
awo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Awo_c25450 (polC2)
DNA replication proteins [BR:
awo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Awo_c25450 (polC2)
DNA repair and recombination proteins [BR:
awo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Awo_c25450 (polC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
DEDDh_C
Rv2179c-like
RNase_H_2
DUF655
HHH_3
POT1
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AFA49302
UniProt:
H6LE69
LinkDB
All DBs
Position
complement(2979093..2983355)
Genome browser
AA seq
1420 aa
AA seq
DB search
MSIITRRQERYQKIIADYHLITESIKINSSKEELIFKFSTPQKQTDTEFINREMQEIFDY
AQSLQVEVAPLKYKNGEQLLATDSQGVSQLLMGINQKIANILLINTLMAENNTFYVRGRS
TGELDGEALAIFASRFKRLIAEHYGVAAELVVRFTDTESVTEKSQQDLEKRLANIKPVTS
NNNANSTSSAKLPKAEKPGDVVFGKKITKPAEWLKFVDFSINGESEGKSLVIRGWVFGIN
TRALKNNKTLLTFNITDNTNSITCKIFTDKEEIVESIKEGNWYLLEGKINYDDYSQEMMF
YPRNINLSKETIRTDDAPIKRIELHLHSQFSSMDAVSKVDKIMKQASDFGHDTIGITDHG
VLQAYPEMMELGRKKKIKVLYGVEGYLVEDQLNMVFGDQDQDFCGEFTFFDLETTGLIPG
NHKIIEIAAVKIKNKQIIDSFSTLVNPHCEIPAFITNLTNITNQMVTEGMEERDAIEKFL
EFSGDTILVAHNAPFDMSFFTKALADHQISRVNTAVDTLAMSRSLLTQITKHTLKKLCSF
FKIDIHNHHRALDDAAASAKVFVKLLDLAEKKGCTSIQTLNDTLSSRERSIRLNPVNHII
IYAKNQAGIKDLYRLVSESHLNYFYKKPRIPKSLLAESRENLLLGSACEAGELFTAMLHN
KSQEEIQQIASFYDYLEVQPLGNNQYLVDNNSVPDQEALKTLNKRIINLAKDLNKPVVAT
GDVHFVNKEDSLYREILFTGQGYKDASKQPPLYYRTTQEMLDEFDYLDEATAREIVIDNP
RKISEMIEAVLPIPDGTYPPVIEGSDDEIREMVEDRAKELFGHPLPEIVEKRIKKELDSI
IGNGYSVLYLIAQKLVHHSMEDGYLVGSRGSVGSSFVATLCGITEVNPLAPHYRCPNCKY
SKFFDSNEVGVGPDLKDATCPHCHTKLEKDGFDIPFETFLGFEGDKEPDIDLNFSGENQA
EAHRYTEVLFGKGKVFRAGTISTIAEKTAFGFVKNYYDEKEIKPTRAELERVIQCCAGVK
KTTGQHPGGIMVVPTYKDIYDFCPVQRPADDTESDTVTTHFAYESISGRLLKLDILGHDD
PTMLKMLKDFTGIDPVGIPLDDEKTMSLFTSTKALDFKDNDFESPLGVCGIPEFGTSFVR
EMLLDTKPTAFSDLIRISGLSHGTDVWLNNAQDLIRDKKATIKEAICTRDDIMIYLIYAG
LEAKTSFTIMEAVRKGKGLKPEWEETMRKNKVPEWYIDSCKKIKYMFPKAHAAAYVTMAF
RIAWYKVYYPQAYYATYFSVRASEFDAQLISQGKNGVVERMNQIKELGTKASNKEKSLLT
VLEIAHEMMCRGYTFKNVDVYESHYNQFRIIGDALLPPLNALEGIGDKAAQRIFEEAQLR
PYMSREDLQTRTKVSKSVIETLEKQGCLNQLPASNQITFF
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
ttgagtattattacccgacgtcaagaacgatatcaaaaaataatagcggactatcatctg
ataaccgagagtataaaaatcaattccagtaaagaggaattgatttttaaattttctaca
ccgcaaaaacaaacggatacggaatttatcaatcgcgaaatgcaagaaatatttgattat
gctcaatcgcttcaagttgaagtggcaccgctcaaatataaaaatggtgagcagctactg
gcgacggatagtcaaggggttagtcaattactgatggggattaatcagaaaattgccaat
attttattgatcaacacattgatggctgaaaacaatacgttttatgtccgcggtcgatca
accggcgaattggatggcgaagcgttggcgatttttgcaagtcgctttaaacgactgatt
gccgagcattacggggtggcggcggaattggtagtacgttttacggataccgaatccgtt
accgaaaaaagtcagcaggatttggaaaaacgcttggctaatattaagccggttacttca
aataacaatgcgaattcgacgagttcggcgaagttgccaaaagctgaaaaaccgggtgat
gtggttttcggaaaaaaaattacgaaacccgctgagtggctgaaatttgtcgattttagc
attaatggtgagtctgaaggaaaaagtctggtcattagagggtgggtgtttggcatcaat
acccgcgctcttaaaaataataaaacgttgttaacttttaatataaccgacaataccaac
agcattacctgtaaaatatttacggataaagaagaaattgttgaaagcatcaaagaaggc
aattggtatctgcttgaaggtaaaatcaattatgatgattattctcaggaaatgatgttt
tacccgcgcaatattaatctgtcaaaagaaacaatccgcaccgatgatgccccgattaaa
cggattgagcttcatttacatagccagttcagctcaatggatgcagtcagtaaagtggac
aaaataatgaagcaagcttccgattttggccatgatacgattggtattaccgatcatggg
gttttacaggcgtatccggaaatgatggagttgggacgaaagaaaaaaattaaggtgctt
tacggggtcgaaggttatttagtcgaagaccagttaaatatggtttttggcgatcaggat
caggatttttgtggtgaatttactttttttgatctggaaacgacaggcctgattcccgga
aatcataaaattatcgaaatagccgcggtcaagattaaaaataagcagatcattgacagt
ttctcaacgttagtaaacccgcattgtgaaattcccgcatttattactaatttaaccaat
attaccaatcaaatggtaacggaagggatggaagagcgggacgcgattgaaaaatttctg
gagttttccggcgatactattttagtggcccataatgctccttttgatatgagctttttt
accaaggctttggcagatcatcagattagccgggtcaatacggcggtagatacgttggcg
atgtcgcgttcgctactcacgcaaatcaccaaacatacccttaaaaaattgtgtagtttt
ttcaaaatcgatattcataaccatcatcgggccttggatgatgccgcggcatcagcaaag
gtatttgtgaaactgttggatttagcagaaaaaaaagggtgtacgtcaattcaaacgtta
aacgacaccctttccagtcgcgagcggagcattcgccttaatccggtcaatcacattatt
atttatgccaaaaatcaggccggaattaaagatctgtaccgacttgtttcagagtcgcat
ttgaattatttttataaaaaaccgcgcatcccaaaatcactgctagctgaaagtcgggaa
aatctgttgctggggtccgcttgtgaagccggggaattgtttacagcaatgctgcataat
aaatcgcaggaagaaattcaacagattgccagtttttatgactatttagaagtacagccg
ttaggaaacaatcaatatcttgttgacaataatagtgtgccggatcaggaagccttaaaa
acgctaaataaacgaattattaatttagccaaggatttaaataaaccagtggtggcgacc
ggcgatgttcattttgtcaataaggaagattcgctttaccgggaaattttatttaccggt
cagggttataaggatgccagtaaacaaccgccgttatattatcgtaccactcaggagatg
ttggatgaatttgactaccttgacgaagcgacggcacgtgaaattgtgattgataatccc
cgtaaaattagcgagatgattgaagcggtgttgccgattcccgatggcacctatccaccg
gttattgaaggttctgatgatgagatccgcgaaatggttgaagatcgggcgaaagagctg
tttggccatcccttgccggaaattgtcgaaaaacgaattaaaaaagaattggattcgatc
atcggaaatggttattcggtgttgtatctgattgcccagaagctggtgcaccattcgatg
gaagatggctatctggttggttcccggggttcggtcgggtcatcgtttgtggcgactctt
tgtggaattaccgaggttaatcctttggcacctcactaccgttgtcctaattgtaaatat
tcaaaattttttgacagtaacgaggtcggggttggtccggatttaaaggatgcgacgtgt
ccgcattgtcataccaagttggaaaaagacgggtttgatattccctttgaaacatttttg
ggatttgagggtgataaagagccggatatcgatcttaatttctccggtgaaaatcaggct
gaagcgcatcgctatacggaagttctttttggtaaaggaaaagtattcagagcaggaacg
atttcgacaattgccgaaaaaacggcttttggttttgtcaaaaactattatgatgaaaaa
gaaattaagccgacccgtgctgagttggagcgggttattcaatgttgtgccggggtaaaa
aaaacgaccggccaacatcccggcggcattatggtggtgccgacttataaagatatatac
gatttttgcccggtgcaacgtccggctgacgataccgaaagcgatactgttaccacccac
tttgcttatgaatcgatcagtggtcgattgctaaagcttgatattctggggcatgatgat
cccaccatgctgaaaatgctaaaagattttaccggcattgatccggtcgggattcccctg
gatgatgaaaaaacaatgagtttgtttacttcgaccaaagctttggattttaaagataac
gattttgaatcaccattaggcgtctgtggaattcccgaatttgggaccagttttgttaga
gaaatgcttttggacaccaaacctacggcgttctccgatctgattcggatttccggactg
tcgcatggaaccgatgtatggctgaataatgcgcaggatttgatccgggataaaaaggcg
acgattaaagaagctatttgtacccgggatgatatcatgatctatttgatttatgccggt
ttggaagccaaaacatcgtttaccattatggaagccgtccgaaaaggcaaaggacttaaa
ccggaatgggaagagacgatgcgaaaaaataaggttcccgaatggtatattgattcctgt
aaaaaaattaaatatatgttcccgaaagcccatgctgccgcttacgtcacgatggctttt
cgaattgcctggtacaaagtgtattatccacaggcttattatgccacttatttttccgtt
cgggccagtgaatttgatgcgcagcttatcagtcaaggtaaaaacggcgtggttgagcgg
atgaatcagattaaggaattaggaacaaaagcatcaaataaagaaaaatcattattaacg
gtattagaaattgcccacgaaatgatgtgtcgcggttatacctttaaaaatgtggatgtg
tatgaatcgcattataaccaattccggattattggcgatgcgttattgccacctttaaac
gccttagaaggaattggcgataaagccgcccagcgaatttttgaagaagcgcaacttcga
ccttatatgtcgcgtgaggatttgcagacccggacaaaggttagtaaatcggttattgaa
acgctggaaaaacaaggttgtttaaatcagttgccggcatctaatcagataaccttcttt
taa
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