Acetobacterium woodii: Awo_c25600
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Entry
Awo_c25600 CDS
T01732
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
awo
Acetobacterium woodii
Brite
KEGG Orthology (KO) [BR:
awo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
awo03400
]
Awo_c25600 (addB)
Enzymes [BR:
awo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Awo_c25600 (addB)
DNA repair and recombination proteins [BR:
awo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Awo_c25600 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AFA49317
UniProt:
H6LE84
LinkDB
All DBs
Position
complement(3002185..3005529)
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AA seq
1114 aa
AA seq
DB search
MMVGRQSQVLSETVYRQISEALASKKEKLYLMVPEQFTLGAEEALIQANQFSGLLNVEVL
SPKRLGNRVLQETGGLIKTYMDNHGKDMLLQKALSDIQEDLTIYRSSVKKPGFLRSISDL
ISELKQNEITLTQLELTQKNLNHGIMLQKMDDVIKIYRYFQELLGSDRKDQEDFRNLVCQ
KIPLAKFLKNGEIWLDGFQNFSAQDYQMIRNLATTVNEIHIALPYDPNPDARDQEVFQLT
QNTINALKQIGASSAVSFKLESVSGDLAKQPELKHLEANLFAYPKKIFNQEVQKITLNQC
QNTWEEVETGARKIIELIRDDGFSFRDIVVLTGDMEEYGSIIKRVFTQYKIPFFMDDLRA
IGDNHLIEAVVTALEVIQNNYRIDDVFGFVKTGFATITLEECEDLENYAIEFGIRGKQWE
REFTRISQNEALDLENLNVLRKRLMIPLVQLKEAMALGKTAKDYTKALYDFLVATAIPEK
IDSLVEKLTEAGNYEAMEIYHQIWNILIEVFDQIVETMGDDAMTKDAYLRILKSGFQGYQ
LGIIPPQRDYVSITDLRRSRSSAFEVLIVFGLNEGKIPGSGTEPNLFSDLERQILGAHQI
KLQNNRSFQMDQERFLVYDLLTRPKSQLALHWALADMEGKTQQPSILLSQLVEIFPKIQI
NSAINDGVERFWELLSTPEGTLWQLISYLRNNQDADNNPEKIKAAALWNVVKVWYKNNPD
YQKRYQNLLTALNYTGVSQEMTGSEATTLYGKNLRTSITRLETHRQCPFSHYVKYGLKPQ
GRPIYNIEAPEIGTLLHELIDGFFRTVQAKNLDLRSLPKTQRDKMVEDVMAKCLPQIKTN
VFNSTGQNQYLGKKLERVGKKSIDILVQQLCAGEFEPKATEFSFEREVSLPDTQLGEVKI
YGKIDRLDLYEKDGNTWVKVVDYKTGSKKLGYDDIYYGLSLQLLVYLDGAMMVIDADELL
PGGTFYFYVDDPMPRLDFGEKIEAAINKSFKLNGLLLDDAVVIAAMDHNSDTKTSEILPV
YRSEFKLSQNEFEEIIDYVRKTVVRQIKKIYEGDIKIRPYKKGNTRACQFCEYKGICQFD
DEIIKGGYDVLKATMKKEQFFKLIQGGDTDAVDQ
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgatggttggccggcagtcacaggttttgagcgaaacggtttatcggcaaatcagcgag
gcgttagcatcaaaaaaagaaaaactttatttaatggttcccgaacagtttactttaggc
gctgaagaagcattgattcaggccaatcagttttcgggattattaaatgttgaagtgctc
agtcccaaacgattgggaaaccgcgtgttacaggaaaccggcgggctgataaaaacctac
atggataaccacggcaaagatatgctgttgcagaaagctttaagtgacatccaggaagat
ttaaccatttatcgttccagtgttaaaaaaccgggttttctcagaagtatttccgattta
atcagtgaattaaagcaaaatgagatcaccctgacgcaattagaactgacgcaaaaaaac
ttaaatcatggaattatgttgcaaaaaatggatgatgtgattaagatctatcgctatttt
caagaactattggggagtgatcgtaaagatcaggaagattttcgaaatctggtttgtcaa
aaaattccgttagcaaagttcctgaaaaatggcgaaatctggctcgatggttttcaaaac
ttttctgcccaggattatcagatgattcgcaatttggcaacaacagttaatgaaatccat
attgcgttaccctacgatccaaatcctgacgccagagatcaggaggtttttcaattaact
caaaataccatcaatgcgcttaagcaaattggtgcgagtagcgcggtttcgtttaaactg
gagtcggtttcaggagatcttgctaaacaaccggaactcaaacatctggaagccaatctt
tttgcttaccccaaaaaaatctttaatcaagaagtgcaaaaaataaccttaaaccaatgt
caaaacacctgggaagaggtggaaacaggggcccgcaaaattattgagcttattcgcgac
gacggtttttcttttcgcgatatcgttgttctgactggcgatatggaggaatatggcagt
atcatcaaacgggttttcacgcaatataaaatcccgttttttatggacgatttacgggcg
attggcgataaccacttgattgaggcggtggtgacagcgttagaggtgatccagaataat
taccggattgatgatgtttttggttttgttaaaaccggttttgcaacgattacccttgaa
gagtgtgaagatttggaaaattatgcgattgagttcggaatccggggcaaacaatgggaa
cgtgaatttaccaggatcagccagaatgaggcactggaccttgaaaatttgaatgtcctc
agaaaaagactgatgattccgctagtccagttaaaagaagcgatggcactgggaaaaacc
gcgaaagattataccaaagcgttatatgactttttagtagcgacagcaattcctgaaaaa
attgatagcttagtcgaaaaattaaccgaagccggtaattatgaagcgatggaaatctac
catcagatttggaatattctgatcgaagtttttgatcaaattgtcgaaaccatgggtgat
gatgcgatgacgaaagacgcttatttacgcattttaaaaagcggctttcagggttatcag
ctggggattattccgccgcagcgggattatgtcagtattactgatttacgacgaagtcgc
agtagtgcgtttgaagtattgatcgtttttggtttaaatgaagggaaaattcctgggagc
ggaaccgaaccaaatcttttttcggatttagagcggcagatattaggtgcccatcagatt
aaactgcaaaataaccggagttttcaaatggatcaggaacgatttttggtttatgattta
ttaaccagacccaaatctcagttagcactacattgggcacttgccgatatggaaggaaaa
acacaacaacccagtattttactcagtcaactggttgagatttttccgaaaattcaaatt
aattcggccataaatgatggcgttgagcgattctgggagcttttgagtaccccggaaggg
acgctgtggcagttgatcagttatttaagaaacaatcaggatgccgataataacccggaa
aaaataaaggccgcggcattgtggaacgtggtgaaggtgtggtataaaaataatccggac
tatcaaaagcgctatcagaatttgttgacagcgcttaactataccggggtatctcaggaa
atgaccgggtctgaggcaacgacactttatggaaaaaatctgcggaccagcataacgcgg
ttggaaacgcaccggcaatgtcctttttcgcattacgtcaaatatggattaaaaccccag
ggccggccgatttataatattgaagcaccggaaatcggtacgttgctgcatgaactgatt
gatggttttttcagaaccgttcaagcgaaaaatcttgatctgcgaagcttgcccaaaacc
caacgggataagatggttgaagacgttatggcaaaatgtctgccgcagattaaaactaac
gtgtttaacagtaccggacaaaatcagtacctgggtaaaaaactcgaacgagtcgggaaa
aagtcgattgatattttggtgcagcaattgtgcgccggtgagtttgaaccgaaagcaact
gaatttagttttgagagagaggtcagcttgccggatacccagttgggtgaagtgaaaatt
tatggaaaaattgatcgtctggatttatacgaaaaggatggcaatacttgggtcaaggtg
gttgattataaaaccggcagcaaaaaattaggttacgatgatatttattatggattatcg
ctgcaattgctggtttatttagatggagccatgatggtcattgatgccgatgaattactg
cctggcggtactttctacttttatgtcgatgatccgatgccgcggttggattttggtgaa
aaaattgaagcagcgatcaataaatctttcaaattaaatggcttgctgttggatgacgcg
gttgtcattgcggccatggatcataatagtgacaccaaaacgtcagaaattttaccggta
tatcggtcggaatttaaattaagtcaaaacgaatttgaagagatcatcgattatgtcaga
aaaaccgttgttcgtcagattaaaaagatttatgagggcgatataaaaattcgcccttat
aaaaaaggtaacacccgtgcctgccaattttgtgagtataagggcatttgccaatttgat
gatgaaattattaaaggtggttacgacgttttaaaagcgaccatgaaaaaagaacagttt
tttaaattaattcagggaggtgataccgatgcagtggaccagtga
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