Actinomadura welshii: ACN3XK_00310
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Entry
ACN3XK_00310 CDS
T10979
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aws Actinomadura welshii
Pathway
aws03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACN3XK_00310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aws03400
]
ACN3XK_00310
Enzymes [BR:
aws01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ACN3XK_00310
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ACN3XK_00310
DNA repair and recombination proteins [BR:
aws03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACN3XK_00310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
Zn_ribbon_8
Prok-RING_1
FANCI_HD1
DUF294_C
Motif
Other DBs
NCBI-ProteinID:
XRQ09390
LinkDB
All DBs
Position
58568..59431
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVEALAGFLRERVVGHAIARIDVLAISALKTYDPPVTSLGGLTVTGASRHGKFLD
LDVDGLHLVIHLARAGWLRWRDEIPARPARPGGKNPLAVRVHLDDGSGFDLTEAGTKKGL
AVYVVRDPADVPGVASLGPDPLDDAFTPEALGAIVDGKRTQIKGLLRDQKVIAGIGNAYS
DEVLHVARMSPFKIAASLTADDVATLHEAIVTTLRDAVERSRGLEAQDLKGEKKTGLRVH
ARTGQKCPVCGDTVREVSFADSSLQYCPTCQTGGKPLADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctacctgaggtcgaggcgctggcgggcttcctgcgggagcgcgtggtcggt
cacgccatcgcccggatcgatgttctcgccatctccgcgctgaagacctacgacccgccg
gtgacctcgctgggcgggctgaccgtcaccggcgcgtcccggcacggcaagttcctcgac
ctggacgtcgacgggctccacctcgtgatccacctggcccgcgccggctggctgcggtgg
cgggacgagatcccggccaggccggcgcgccccgggggcaagaacccgctcgcggtgcgc
gtccacctggacgacggctccggcttcgacctgacggaggccgggacgaagaagggcctc
gccgtgtacgtcgtccgcgatcccgccgacgtgccgggcgtcgcgtccctcggccccgac
ccgctggacgacgcgttcacccccgaggcgctcggcgcgatcgtcgacggcaagcgcacc
cagatcaagggcctgctgcgcgaccagaaggtgatcgccgggatcggcaacgcctactcc
gacgaggtcctgcacgtcgcgcggatgtccccgttcaagatcgccgcgtcgctgaccgcg
gacgacgtcgcgaccctgcacgaggccatcgtcaccaccctccgcgacgcggtggagcgc
tcgcgcggcctggaggcgcaggacctcaagggcgagaagaagaccggcctgcgggtgcac
gcccgcaccggtcagaaatgcccggtctgcggtgacacggtccgcgaggtgtcgttcgcc
gactcgtccctccagtactgcccgacgtgccagacgggcggcaagccgctcgccgaccgc
cggatgtcccgcctcctcaagtga
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