Actinomadura welshii: ACN3XK_14675
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Entry
ACN3XK_14675 CDS
T10979
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aws Actinomadura welshii
Pathway
aws03420
Nucleotide excision repair
aws03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACN3XK_14675
03430 Mismatch repair
ACN3XK_14675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aws03400
]
ACN3XK_14675
Enzymes [BR:
aws01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACN3XK_14675
DNA repair and recombination proteins [BR:
aws03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACN3XK_14675
MMR (mismatch excision repair)
Other MMR factors
ACN3XK_14675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
XRQ12083
LinkDB
All DBs
Position
3188992..3192387
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AA seq
1131 aa
AA seq
DB search
MITPGELARLLEIPEPTDEQARVIEAPMAPMAVIAGAGSGKSETMAARVVWLVANGFVRP
ERVLGLTFTRKAAAELGVRVRKRLDTLREVLPGDELERLGGDALFDGEPMVSTYHSYAAR
LFGDHALREALEPTMRLISPAVAWQLCSRVVDAYNGPMDRVDWQPDTVTKAVMELAGDLS
EHLRTAEDVRKVGTWLDERFAVVRKPLKAQRDILAKHAVREQLMPLVEAYGRVKAEREVV
DHGDQMALAARIAARHPEVGMIERSRFSVVLLDEYQDTSQAQLVLLKSLFAGGHPVTAVG
DPCQSIYGWRGASAGNLLRFAHDFPLRPGAAGGRPVPAPVVQLSRSFRNGEQILEAAATI
QEELRAETKAVPRLVPGAGREGRGRVECALFRTVEDEADRIAARIARLMAGDPGTAPDGG
PQGEPLQYADIAVLARKRSQFPLIRRALEARGIPVEVVGLGGLLTVPEVQDVVATLRVMH
DPTAGASLARLLTGPRWRLGPRDLVALGRRARTLAQEAARDVTPPEGTASEEPPPEETPA
GDAPAGDAPPEQGDGDPLRRLVGELNQETGSLVDALDDLGPPDAYSPEGYGRLRRLRDEL
RTLRGQVGLPLPDLVNEVERALGLDIEVAARSGLDPVTARADLDAFIDAAAAFAGDAEDP
TLGAFLAYLKAAETEEFGLEAGRVGETNSVKLLTVHASKGLEWPVVVVPGLSYVPQRNGG
PAKGSVFPSPPQNATRWTANPRVLPFMLRGDRADLPPLNGLEKDDLAAFDQACSERDLRE
ERRLAYVAVTRASSLLITTGYWWGSSGRPLGPSPFLEEVRAVCLAGAGSVAAWADPPEEG
AGNPLLADPDEAEWPVAPGDRGRSGVPARERYEAVVEAARMVGDEMAGRTRPWAGDAGLS
DGDRARMSAWARDVELLLAERDRGRGGDGTLVELPARLSVSSLVSLARDPAALARRIRRP
MPGPPAPYARRGTAFHAWLESRWGQQRLLDPDELPGAADEGAADDAQLERLRARFEESEW
ASREPLDIEVPFETVIGDRLVRGRMDAVFRSGDGGYEVVDWKTGSPPSGDEARFVSVQLA
AYRLAWAELAGVDVGRVSAAFHYVSANVTVRPADLLDAAGLAALLDGVPAA
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
gtgatcacgccgggagagctggcccggctgctggagatcccggagccgaccgacgagcag
gcccgggtgatcgaggccccgatggcgccgatggcggtgatcgcgggcgccgggtccggc
aagagcgagacgatggccgcgcgggtggtgtggctggtcgcgaacggcttcgtccggccg
gagcgcgtcctcggcctcaccttcacccgcaaggccgcggccgagctgggcgtccgcgtg
cgcaagcggctcgacacactgcgcgaggtcctgcccggcgacgagctggagcggctcggc
ggcgacgccctgttcgacggcgagccgatggtgtcgacgtaccactcctacgccgcgcgc
ctcttcggcgaccacgcgctgcgcgaggccctcgaacccacgatgcggctcatctcgccg
gcggtggcgtggcagctctgctcccgcgtcgtggacgcctacaacggcccgatggaccgc
gtcgactggcagcccgacaccgtcaccaaggccgtcatggaactggccggggacctctcg
gagcacctgcggacggccgaggacgtccgcaaggtcgggacgtggctggacgagcgattc
gccgtcgtgcggaagccgctcaaggcgcagcgcgacatcctcgccaagcacgccgtccgc
gagcagctgatgccgctggtcgaggcgtacgggcgggtgaaggcggaacgggaggtcgtc
gaccacggcgaccagatggcgctggccgcgcggatcgccgcccggcaccccgaggtcggg
atgatcgagcgctcgcggttctccgtcgtgctgctcgacgagtaccaggacacgagccag
gcgcagctcgtgctgctcaagtcgctgttcgcgggcgggcacccggtgaccgcggtgggc
gacccctgccagtccatctacgggtggcggggcgccagcgcggggaacctgctgcggttc
gcgcacgacttcccgctgcggccgggggccgcggggggccgcccggtcccggcgcccgtc
gtccagctgagccgctcgttccgcaacggcgagcagatcctggaggcggcggcgacgatc
caggaggagctgcgggcggagacgaaggccgtgccccggctcgtccccggcgcggggcgg
gagggccgcgggcgggtcgagtgcgcgctgttccgcaccgtcgaggacgaggccgaccgc
atcgccgcgcgcatcgcccggctcatggccggcgaccccgggaccgcccccgacggcggg
ccgcagggggagccgctccagtacgccgacatcgcggtcctcgcgcggaagcggtcgcag
ttcccgctcatccggcgggcgctggaggcgcgcgggatccccgtcgaggtcgtcgggctc
ggcgggctcctcacggttcccgaggtgcaggacgtcgtggcgaccctgcgcgtcatgcac
gacccgaccgccggggcgtccctggcccggctcctcaccggcccgcggtggcggctcggc
ccgcgcgacctcgtcgccctcgggcgccgggcgcgcaccctcgcccaggaggccgcccgg
gacgtcacacccccggaaggcacggcctcggaagaaccgcccccggaggagacgcccgcg
ggggacgcgcccgcgggcgacgcgccgccggagcagggcgacggcgacccgctgcgccgc
ctcgtcggggagctgaaccaggagaccggcagcctcgtcgacgcgctcgacgacctcggc
ccgccggacgcgtactccccggaggggtacgggcggctgcggcggctccgcgacgagctg
cgcacgctgcgcggccaggtcgggctgccgctgcccgacctcgtcaacgaggtcgagcgc
gccctcgggctcgacatcgaggtcgcggcgcgctccgggctggacccggtcaccgcccgc
gccgacctcgacgccttcatcgacgccgccgccgcgttcgccggcgacgccgaggacccg
acgctcggcgcgttcctcgcctacctcaaggcggcggagacggaggagttcgggctggag
gccgggcgggtcggggagaccaacagcgtcaagctcctcaccgtgcacgcgtccaagggc
ctcgaatggccggtggtcgtcgtccccggcctgtcgtacgtcccgcagcggaacggcggc
cccgccaagggctcggtgttcccgtcgccgccgcagaacgcgacgcgctggacggcgaac
ccgcgcgtgctgccgttcatgctgcgcggcgaccgcgccgacctgccgccgctgaacggg
ctggagaaggacgacctcgccgcgttcgaccaggcgtgctccgaacgcgacctgcgggag
gagcggcggctcgcgtacgtcgcggtgacccgcgcgtccagcctgctgatcaccaccggg
tactggtgggggtcgtcggggcgcccgctcggcccgtcgccgttcctggaggaggtccgg
gcggtctgcctggccggggcggggtcggtcgcggcgtgggccgatccgccggaggagggc
gccggcaacccgctgctcgccgaccccgacgaggcggagtggcccgtggcgcccggcgac
cgcggccgttccggcgtgccggcgcgcgaacggtacgaggcggtcgtcgaggcggcccgc
atggtcggggacgagatggcggggcggacgcggccgtgggccggggacgccgggctgtcc
gacggcgaccgcgcccgcatgtcggcctgggcgcgggacgtggagctgctgctcgccgaa
cgcgaccgggggcgcggcggcgacgggacgctcgtcgagctcccggcgcggttgtcggtg
tcgtcgctggtgtcgctggcccgtgacccggcggcgctggcgcggcggatccgccgtccg
atgccgggcccgcccgcgccttacgcgcggcgcggcaccgcgttccacgcctggctggag
agccgctgggggcagcagcgcctcctcgaccccgacgagctgcccggcgcggccgacgag
ggcgccgccgacgacgcgcagctggagcggctgcgcgcccggttcgaggagtcggagtgg
gcgtcgcgggagccgctcgacatcgaggtcccgttcgagaccgtcatcggcgaccggctg
gtccgggggcgcatggacgcggtgttccggtcgggggacggcggctacgaggtcgtcgac
tggaagaccggttcgccgccgtcgggggacgaggcccgcttcgtgtcggtgcagctcgcc
gcgtaccggctggcgtgggcggagctggccggcgtggacgtcgggcgggtcagcgccgcg
ttccactacgtgagcgccaacgtcacggtccggccggcggacctgctggacgcggcgggc
ctggcagcgctcctggacggcgtccccgccgcgtaa
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