Actinomadura welshii: ACN3XK_18460
Help
Entry
ACN3XK_18460 CDS
T10979
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
aws Actinomadura welshii
Brite
KEGG Orthology (KO) [BR:
aws00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aws03000
]
ACN3XK_18460
Transcription factors [BR:
aws03000
]
Prokaryotic type
Helix-turn-helix
Other families
ACN3XK_18460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_14
HTH_8
HTH_50
HTH_7
HTH_23
HTH_22
HVO_A0261_N
HTH_17
HTH_30
Xre-like-HTH
Sigma70_r4_2
HTH_29
Sigma54_activat
Sigma54_activ_2
HTH_28
HTH_20
HTH_IclR
HTH_11
TPR_leprecan
AAA_16
HTH_24
Motif
Other DBs
NCBI-ProteinID:
XRQ12790
LinkDB
All DBs
Position
4081472..4083274
Genome browser
AA seq
600 aa
AA seq
DB search
MTGAASGGGPPVPRTRAEWERVREAKLEVQRRDPLAVTAADHPGVRPEVVDSWRRSMLAG
VDPAASSYVVDDGFQPRTRLAAVAQPIMNRLKDEISDLNCWGFLADRACRLLTVVVGDFP
EAGRVHRQNLRPGMSFAEDLMGTNGLGCAHETQRPFIISGTEHFRTDTEIITTTGVIIHD
PFTGRYAGTLGVHCLREYGTSALLPLVVEIGRSIETQLLASRTDGERAFFDAFSAARRRY
RGTVVGVSGRLCVVSTRARALVREADEELLRRLAEECGARSRTVRRNLSSGATVTIQILP
VPQPRGEFAAVLVLQPDAGPGREDAAHDGQRAGSGTGDEPPADFRERLARALRTRRPVLL
AGERGTGKQHEARAALRALGRRGGVAEFDGALAHLDPAGWLRRLAAAVQEDGAAVLLAHV
ADLPAEAGTTVAHLVAGARAQVVGTTSDDGAEDGGAMLVRESFPVVVAVPPLRERRGEFE
ALCTGLFAGLAEPGEEPAALTPRAMAALMASDWPGNVRQLKQVLASARIRVRGPVIDLRD
LPARHGRNPARGPLDEVEAAERRVLRDALRRAGGDRNAVAERLGISRATVYRKLKRHELD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
gtgacgggggccgcgtccggcggcggcccgccggtcccgcgcacccgcgccgaatgggag
cgggtccgggaggcgaagctggaggtgcagcgccgcgacccgctcgcggtgaccgcggcc
gaccatcccggcgtccgcccggaggtggtcgactcgtggcggcgctcgatgctcgccggc
gtcgacccggccgcgtccagctacgtcgtcgacgacgggttccagccccggacgcgcctg
gccgcggtggcccagccgatcatgaaccggttgaaggatgagatctccgacctcaactgc
tggggcttcctcgccgaccgcgcgtgccgcctgctgaccgtcgtcgtcggggacttcccg
gaggccgggcgggtgcaccggcagaacctccggccgggcatgtcgttcgccgaggacctg
atggggacgaacggcctcggctgcgcccacgagacgcaacggcccttcatcatctccggc
accgagcacttccggacggacaccgagatcatcaccaccaccggggtgatcatccacgat
ccgttcaccgggcggtacgccgggacgctgggggtgcactgcctccgcgagtacggcacg
tcggcgctgctgccgctggtggtcgagatcggccgttccatcgagacgcagctgctggcg
agccggacggacggcgagcgtgccttcttcgacgccttctccgcggcccggcggcggtac
cgcggcacggtcgtgggcgtcagcgggcgcctgtgcgtggtgagcaccagggcccgcgcg
ctggtccgcgaggcggacgaggaactgctacggcgcctggcggaggagtgcggcgcgcgg
agccgcaccgttcgccggaacctgagctccggggcgacggtgacgatccagatccttcct
gtgccgcagcccaggggtgagttcgccgccgtcctcgtcctgcaaccggacgccggcccg
ggacgggaggacgccgcacacgatggacagcgggctgggagcgggaccggtgacgaaccg
ccggccgacttccgcgagcggctggcacgcgcgctgcggacgcggcgacccgtcctgctc
gccggggagcgcggaaccggcaagcagcacgaggcgcgggcggcgctgcgcgccctcggc
cgccgcggcggggtcgccgagttcgacggggccctggcgcacctcgacccggccggatgg
ctgcgccgcctggccgccgccgtgcaggaggacggcgccgccgtgctcctcgcccacgtc
gcggaccttcccgccgaggccgggacgaccgtggcgcacctggtggcgggggcccgcgcg
caggtggtcggcacgacgtccgacgacggcgcggaggacggcggcgcgatgctcgtccgg
gagagcttccccgtggtggtggccgtcccgccgctgcgcgagcgccgcggcgagttcgag
gcgctctgcacgggcctgttcgccggcctcgccgagccgggggaggagccggcggcgctg
acgccgcgggccatggccgcgctgatggcgagcgactggcccggcaacgtccgccagctg
aagcaggtgctcgccagcgcccggatccgcgtgcgcggcccggtgatcgacctgcgggac
ctgcccgcgcggcacggccggaacccggcccgcggccccctggacgaggtggaggcggcc
gagcggcgggtgctcagggacgcgctccgcagagccgggggcgaccgcaacgccgtcgcg
gaaaggctcgggatctcccgcgccaccgtctaccgcaagctcaagcgccacgaactggac
tga
DBGET
integrated database retrieval system
