Actinomadura welshii: ACN3XK_40195
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Entry
ACN3XK_40195 CDS
T10979
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aws Actinomadura welshii
Pathway
aws03030
DNA replication
aws03430
Mismatch repair
aws03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACN3XK_40195 (dnaE)
03430 Mismatch repair
ACN3XK_40195 (dnaE)
03440 Homologous recombination
ACN3XK_40195 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aws03032
]
ACN3XK_40195 (dnaE)
03400 DNA repair and recombination proteins [BR:
aws03400
]
ACN3XK_40195 (dnaE)
Enzymes [BR:
aws01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACN3XK_40195 (dnaE)
DNA replication proteins [BR:
aws03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACN3XK_40195 (dnaE)
DNA repair and recombination proteins [BR:
aws03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACN3XK_40195 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
XRQ02812
LinkDB
All DBs
Position
complement(8798259..8801789)
Genome browser
AA seq
1176 aa
AA seq
DB search
MPDSFVHLHVHTEYSMLDGAARLKQMFGEVERQKMPAIAMTDHGNMHGAYDFHQQATAAG
VTPIIGIEAYMAPESRFHKKKVQWGEPSQKRDDVSGGGLINHKTLWARNKTGLHNLFKLS
SRAYTEGFVFKYARMDEELLAEHADGLMATTGCPSGKVQTRLRLGQFDEALKAAATFQDI
LGKENYFLELMDHGLDIERQVRQGLIDIGKKLNIPPVVTNDSHYTHESEATAHDALLCVQ
VGKQLADPDRFRFNGSGYYIKTADEMRSIDSSDIWAEGCRNTLMIAERVDPAGMFESKDL
MPRFPVPEGETEESWFRKEVWRGLHRRFPGGLPDGYEQQAEYEMDVILGKGYPSYFLVVA
DFINWAKENGILVGPGRGSAAGSLIAYAMGITDLDPIPHGLIFERFLNPERASMPDIDID
FPEDRRAEVIKYTTEKWGADKVSFIATFGTIKAKAAIKDAGRVLGFPYALGDRISKAFPP
AVMGKDIPLSGIFDEKHPRHGEAGELRKLYEEETDVKQIMDLAQGLEGLIRQTGVHAAGV
IMSGETITDHVPIMRRDADGAIITQFDYPTCETLGLLKMDFLGLRNLTIIDDALQGIKKN
KGTEVDLLDLPLDDQPTYDLLARGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVGALYR
PGPMGANSHTNYALRKNGQQEITPIHPELEEPLKEILDTTYGLIVYQEQVMAIAQKVAGY
TLGKADLLRRVMGKKKKAELDAQFVGFEQGMVDNGFSKEAVKTLWDILVPFSDYAFNKAH
SAAYGLVSYWTAYLKANYPAEYMAALLTSVGDDKDKSALYLSECRRMGLTVLPPDVNTSE
ADFTPLGDTEIRFGLSAVRNVGTNVVDGIVAARKEKGAYTDFNDFLNKVPPIVCNKRVVE
SLIKAGAFDELRHKRKSLLMVHEQAIDSVIDIKRKEAVGQDSLFGALEEDGGDDAFAVTI
PDGDDWDKTTLLAFEREMLGLYVSDHPLLGVEHILEREADCAIAALNEGERPDGQIVIVA
GLLSGLQRKVTKQGNSWAMFQLEDLAGSIEVLCFPSSYQLCSTLLAEDAILIVKGKLDRR
EDVAKIIAMEVTQPDLTVTDASGPFSVTMPLGRCTPPTVSRLKEVLITHPGTAEVHLHVQ
NGPRTTVVRLDDRLRVAPSPALMGDLKQLLGPSCLG
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgcccgactctttcgttcacctgcatgttcacacggagtactccatgctcgacggagcc
gcccgtctgaagcagatgttcggagaggtcgagcggcagaagatgcccgcgatcgccatg
accgaccacggcaacatgcacggcgcctacgacttccaccagcaggcgacggcggccggg
gtcacgccgatcatcggcatcgaggcctacatggctcccgagtcgcggttccacaagaag
aaggtccagtggggcgagccgagccagaagcgcgacgacgtctccggcggcggcctgatc
aaccacaagacgctgtgggcccggaacaagacgggcctgcacaacctgttcaagctgtcg
agccgcgcgtacaccgagggcttcgtcttcaagtacgcccgcatggacgaggaactgctc
gccgagcacgcggacggcctgatggccacgaccgggtgcccgtccggcaaggtgcagacc
cggctgcggctcggccagttcgacgaggcgctcaaggccgcggcgacgttccaggacatc
ctcggcaaggagaactacttccttgagctgatggaccacggcctcgacatcgagcggcag
gtccgccagggcctgatcgacatcggcaagaagctgaacatcccgcccgtggtcaccaac
gactcccactacacgcacgagtcggaggccaccgcgcacgacgcgctgctgtgcgtccag
gtcggcaagcagctcgccgaccccgaccggttccgcttcaacggcagcggctactacatc
aagacggccgacgagatgcgctcgatcgactcgtccgacatctgggccgagggctgccgc
aacaccctcatgatcgccgagcgggtggatccggccggcatgttcgagtccaaggacctc
atgccgcgcttccccgtcccggagggcgagacggaggagagctggttccgcaaggaggtc
tggagggggctgcaccgccgcttccccggcggcctgccggacggctacgagcagcaggcc
gagtacgagatggacgtcatcctcggcaaggggtacccgtcctacttcctcgtcgtcgcc
gacttcatcaactgggccaaggagaacggcatcctcgtcggcccggggcgcggcagcgcc
gcgggctcgctgatcgcgtacgcgatgggcatcaccgacctcgacccgatcccgcacggg
ctgatcttcgagcggttcctgaaccccgagcgcgcgtccatgcccgacatcgacatcgac
ttccctgaagaccggcgggccgaggtcatcaagtacacgacggagaagtggggcgccgac
aaggtctcgttcatcgccacgttcggcaccatcaaggcgaaggccgccatcaaggacgcc
ggccgcgtcctcggcttcccgtacgcgctcggcgacaggatctccaaggcgttcccgccc
gccgtgatgggcaaggacatcccgctgtcgggcatcttcgacgagaagcacccccgccac
ggcgaggcgggcgagctgcgcaagctgtacgaggaagagaccgacgtcaagcagatcatg
gacctggcgcagggcctggaggggctgatccgccagaccggcgtgcacgccgccggcgtg
atcatgtccggcgagacgatcaccgaccacgtcccgatcatgcggcgggacgccgacggc
gccatcatcacgcagttcgactacccgacctgcgagacgctcggcctgctgaagatggac
ttcctgggcctgcggaacctgacgatcatcgacgacgcgctccaggggatcaagaagaac
aagggcaccgaggtcgacctgctcgacctcccgctggacgaccagccgacgtacgacctg
ctcgcccgcggcgacaccctcggcgtgttccagttcgacggcggcccgatgcgctcgctg
ctgcggctgatgaagccggacaacttcgaggacatctccgccgtcggcgccctgtaccgg
ccgggcccgatgggcgcgaactcccacaccaactacgcgctccgcaagaacgggcagcag
gagatcaccccgatccaccccgagctcgaggagccgctcaaggagatcctcgacaccacc
tacggcctgatcgtctaccaggagcaggtcatggcgatcgcgcagaaggtggcggggtac
acgctcggcaaagcggacctgctccgccgcgtcatgggcaagaagaagaaggcggagctg
gacgcccagttcgtcggcttcgagcagggcatggtcgacaacggcttctccaaggaggcc
gtcaagacgctgtgggacatcctcgtcccgttctccgactacgcgttcaacaaggcgcac
tccgccgcgtacggcctggtctcctactggacggcgtacctcaaggcgaactacccggcc
gagtacatggccgccctgctgacctccgtcggcgacgacaaggacaagagcgccctctac
ctgagcgagtgccgccggatgggcctgacggtcctgccgccggacgtcaacacctccgag
gccgacttcacgcccctcggggacaccgagatccgcttcggcctgtcggcggtccgcaac
gtcggcaccaacgtggtggacggcatcgtcgcggcccggaaggagaagggcgcctacacc
gacttcaacgacttcctgaacaaggtcccgccgatcgtgtgcaacaagcgggtggtggag
tcgctgatcaaggcgggcgcgttcgacgagctgcggcacaagcgcaagtcgctgctgatg
gtgcacgagcaggccatcgactccgtcatcgacatcaagcgcaaggaggccgtcggccag
gactccctgttcggggcgctggaggaggacggcggcgacgacgcgttcgccgtcacgatc
cccgacggcgacgactgggacaagaccacgctcctggcgttcgagcgggagatgctgggc
ctgtacgtgtccgaccacccgctcctcggcgtcgagcacatcctggagcgcgaggccgac
tgcgcgatcgccgccctgaacgagggggagcggccggacggccagatcgtgatcgtggcg
ggcctgctgtcgggcctgcagcgcaaggtcaccaagcagggcaactcgtgggcgatgttc
cagctggaggacctcgccggctccatcgaggtgctgtgcttcccgtcgtcgtaccagctg
tgctccacgctgctcgccgaggacgcgatcctgatcgtgaaggggaagctggaccgccgc
gaggacgtcgcgaagatcatcgcgatggaggtcacccagccggacctgacggtgaccgac
gcgtccggcccgttctcggtgacgatgccgctgggccgctgcacgccccccacggtgtcc
cgcctgaaggaagtgctgatcacccaccccggcaccgccgaggtgcacctccacgtccag
aacggcccgcgcaccacagtggtccgcctggacgaccgcctgcgcgtagccccgtcccca
gccctaatgggcgacctgaagcaactactaggcccctcctgcctaggctga
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