Actinomadura welshii: ACN3XK_42265
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Entry
ACN3XK_42265 CDS
T10979
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
aws Actinomadura welshii
Brite
KEGG Orthology (KO) [BR:
aws00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aws03009
]
ACN3XK_42265 (rimO)
Enzymes [BR:
aws01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ACN3XK_42265 (rimO)
Ribosome biogenesis [BR:
aws03009
]
Prokaryotic type
ribosomal protein modification factors
ACN3XK_42265 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
XRQ03207
LinkDB
All DBs
Position
complement(9253928..9255334)
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AA seq
468 aa
AA seq
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MSTRRKVSLITLGCARNEVDSEELAARMEDAGWDLTEGADGADVVVVNTCGFIEAAKKDS
IDTLLAAHDSGAKVVAAGCMAERYGKELAEALPEADAVIGFDDYAGIGERLDDVLAGRRR
EAHTPRDRRTLLPISPVERSAAQAAIPGHGDELPDGVPPASGPRVLRRRLGGGPVAPLKL
ASGCDRRCTFCAIPAFRGAYVSRPPAEVLEEARWLAGHGVRELVLVSENSTSYGKDLGDL
RALEKLLPGLAAVDGVERVRVSYLQPAETRPGLIEAICGTPGVAPYFDMSFQHASGPVLR
SMRRFGDRERFLGLLDQIRRLAPEAGVRSNFIVGFPGESEDDFEELAEFLTAARLDAVGV
FGYSDEEGTEAAALDGKLDPAEVAARVEELTSLAEELTAQRAEDRVGTEVRVLLEDKTEE
GDVEGRAEHQAPEVDGTVRVRGAGLALGEIVTARVTGSEGVDLIADVS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactcgccgcaaggtctcactcatcacgctcggctgcgcccgcaacgaggtcgat
tccgaggagctcgccgcgcgcatggaggacgcggggtgggacctgaccgaaggcgcggac
ggcgccgacgtggtggtcgtcaacacctgcgggttcatcgaggcggccaagaaggactcc
atcgacacgctgctggccgcgcacgactccggcgcgaaggtggtcgccgccggctgcatg
gccgagcggtacggcaaggagctggccgaggcgctcccggaggccgacgcggtcatcggc
ttcgacgactacgccgggatcggcgagcggctcgacgacgtcctggcgggccgccgccga
gaggcgcacacgccgcgcgaccggcggacgctgctgccgatcagcccggtcgagcggtcc
gcggcgcaggcggcgatcccggggcacggggacgagctgcccgacggcgtgccgccggcc
tccgggccgcgggtgctgcggcggcggctcggcggcgggccggtcgcgccgctgaagctg
gcgtccggctgcgaccggcgctgcacgttctgcgccatccccgccttccgcggcgcgtac
gtgtcgcggcccccggcggaggtcctggaggaggcccgctggctcgccgggcacggcgtc
cgcgagctggtcctcgtcagcgagaactccacgtcctacggcaaggacctcggcgacctg
cgggcgctggagaagctgctccccggcctcgccgccgtggacggcgtcgagcgggtgcgg
gtcagctacctgcagcccgccgagacgcggccggggctcatcgaggcgatctgcggcacg
ccgggcgtcgccccgtacttcgacatgtcgttccagcacgcgagcggcccggtgctgcgg
tcgatgcgcaggttcggcgaccgggagcggttcctggggctgctcgaccagatccggcgg
ctcgcgcccgaggcgggcgtgcggtccaacttcatcgtcgggttccccggcgagtccgag
gacgacttcgaggagctggcggagttcctcaccgcggcgcggctggacgcggtcggcgtg
ttcggctactccgacgaggagggcaccgaggccgcggccctggacggcaagctcgacccc
gccgaagtcgccgcaagggtcgaggagctgacgagcctcgccgaggagctgaccgcgcag
cgcgccgaggaccgcgtcggcacggaggtgcgcgtcctgctggaggacaagaccgaggag
ggcgacgtcgaggggcgcgccgagcaccaggcgccggaggtggacgggacggtccgggtc
cgcggcgcggggctcgcgctcggcgagatcgtcacggcccgcgtcaccggcagcgagggc
gtggacctgatcgcggacgtgtcgtga
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