Actinomadura welshii: ACN3XK_42380
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Entry
ACN3XK_42380 CDS
T10979
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aws Actinomadura welshii
Pathway
aws03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aws00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACN3XK_42380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aws03019
]
ACN3XK_42380
03016 Transfer RNA biogenesis [BR:
aws03016
]
ACN3XK_42380
Enzymes [BR:
aws01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACN3XK_42380
Messenger RNA biogenesis [BR:
aws03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACN3XK_42380
Transfer RNA biogenesis [BR:
aws03016
]
Prokaryotic type
tRNA degradation factors
ACN3XK_42380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
XRQ03230
LinkDB
All DBs
Position
complement(9276640..9278985)
Genome browser
AA seq
781 aa
AA seq
DB search
MTEAVRIDGAQTTEAVIDNGSFGTRTIRFETGRLARQAAGSAVAYLDDETMVLSATTASK
KPKENLDFFPLTVDVEERMYAAGRIPGSFFRREGRPSEDAILTCRLIDRPLRPSFAKGLR
NEIQVVETIMALHPDHLYDVVAINAASLSTQLAGLPFSGPIGGVRVALIEGQWVGFPTHP
ELERATFDMVVAGRVLEDGDVAIMMVEAESTRETLKLVGDGATAPTEETIAEGLEAAKPF
IKVLCKAQSDLAAVAAKETAEYPIFLDYQDDVLDAVTAEVSGDLAQALTIAGKQEREARL
DEIKAAAAEKLAQTFEGREKEISAAYRAVTKKLVRERVVRDGLRIDGRGPKDIRQLTAEA
HVVPRVHGSAIFERGETQILGVTTLNMLRMEQMIDTLNPERTKRYMHNYNFPPYSTGETG
RVGSPKRREIGHGALAERALLPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLL
DAGVPLKQMVAGIAMGLIHEGGEYVTLTDILGAEDAFGDMDFKVAGTRDLITALQLDTKL
DGIPASVLAAALRQAKGARLAILDVMQEAIEAPAEMSPNAPRIITIKVPVDKIGEVIGPK
GKMINSIQDDTGADITIEDDGTIYVGATDGPSAEAARQAINSIANPHMPEVGERFLGTVV
KTTTFGAFVSLLPGKDGLLHVSQIRKLHGGARIENVEDVMGVGEKIQVEVTEIDQRGKLS
LVPVEVIEKEAENGAGDGGAAPAAPSASADDESGERRDDGERRPRRRRTRRGGDDTGQRN
S
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
gtgacagaagccgtgcgcatcgacggtgcgcagaccaccgaagccgtgatcgacaacggc
agcttcggcacccgcaccatccgcttcgagacgggccggctggcccgccaggccgccggt
tccgccgtcgcctacctcgacgacgagacgatggtgctgtcggcgacgacggcgtccaag
aagcccaaggagaacctggacttcttccccctgaccgtcgacgtcgaggagcggatgtac
gcggccggccgcattcccggctcgttcttccgccgcgagggccgcccgtccgaggacgcg
atcctcacctgccggctgatcgaccggccgctgcgcccgtcgttcgccaaggggctgcgc
aacgagatccaggtcgtcgagacgatcatggcgctgcacccggaccacctgtacgacgtc
gtggcgatcaacgccgcgtcgctgtccacgcagctggccgggctgccgttctccggcccg
atcggcggcgtccgcgtcgcgctgatcgagggccagtgggtcggcttcccgacccacccc
gagctggagcgcgccaccttcgacatggtcgtggccggccgggtcctcgaggacggcgac
gtcgcgatcatgatggtcgaggcggagtccacccgcgagaccctcaagctcgtcggcgac
ggcgcgaccgcgccgaccgaggagaccatcgccgagggcctggaggcggccaagccgttc
atcaaggtcctgtgcaaggcgcagagcgacctcgccgccgtcgccgccaaggagaccgcc
gagtacccgatcttcctggactaccaggacgacgtgctcgacgccgtgaccgcggaggtc
agcggcgacctcgcgcaggcgctgacgatcgccggcaagcaggagcgcgaggcccggctg
gacgagatcaaggccgccgccgcggagaagctcgcccagacgttcgaggggcgcgagaag
gagatctccgccgcctaccgcgcggtcaccaagaagctggtccgcgagcgggtcgtccgc
gacgggctgcgcatcgacggccgcgggccgaaggacatccgccagctgaccgccgaggcg
cacgtcgtcccgcgcgtgcacggctcggcgatcttcgagcgcggcgagacccagatcctg
ggcgtgaccacgctgaacatgctccgcatggagcagatgatcgacacgctgaacccggag
cgcaccaagcgctacatgcacaactacaacttcccgccgtactccaccggggagacgggc
cgggtcggctcgcccaagcgccgcgagatcgggcacggcgcgctcgccgagcgcgcgctg
ctcccggtgctgccgacccgcgaggagttcccgtacgcgatccggcaggtgtcggaggcc
ctcgggtccaacggctccacctcgatggggtcggtgtgcgcgtccaccatgtcgctgctg
gacgcgggcgtcccgctcaagcagatggtggcgggcatcgcgatgggcctgatccacgag
ggcggcgagtacgtgaccctcaccgacatcctcggcgccgaggacgcgttcggcgacatg
gacttcaaggtcgccggcacccgcgacctgatcaccgcgctgcagctggacaccaagctc
gacggcatccccgcctcggtgcttgccgccgcgctgcggcaggccaagggcgcccggctg
gcgatcctggacgtcatgcaggaggccatcgaggcgcccgccgagatgagcccgaacgcg
ccgcggatcatcaccatcaaggtcccggtcgacaagatcggcgaggtcatcggccccaag
ggcaagatgatcaactcgatccaggacgacaccggcgccgacatcacgatcgaggacgac
ggcacgatctacgtcggggccaccgacggcccgtccgccgaggccgcgcggcaggcgatc
aactcgatcgccaacccgcacatgccggaggtcggcgagcggttcctcggcaccgtcgtc
aagaccaccacgttcggcgcgttcgtgtcgctgctgcccggcaaggacggcctgctgcac
gtctcgcagatccgcaagctgcacggcggcgcccggatcgagaacgtcgaggacgtgatg
ggcgtcggcgagaagatccaggtcgaggtcaccgagatcgaccagcgcggcaagctgtcg
ctggtgccggtcgaggtcatcgagaaggaggccgagaacggcgcgggcgacggcggtgcc
gcgcccgccgcgccctcggcgtccgccgacgacgagtccggggagcgccgcgacgacggg
gagcgccgcccgcggcgccgccgcacccgccgcggcggtgacgacaccggccagcgcaac
tcctga
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