Actinomadura welshii: ACN3XK_43955
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Entry
ACN3XK_43955 CDS
T10979
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
aws Actinomadura welshii
Brite
KEGG Orthology (KO) [BR:
aws00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aws03009
]
ACN3XK_43955 (rimO)
Enzymes [BR:
aws01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ACN3XK_43955 (rimO)
Ribosome biogenesis [BR:
aws03009
]
Prokaryotic type
ribosomal protein modification factors
ACN3XK_43955 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
XRQ03523
LinkDB
All DBs
Position
complement(9620227..9621633)
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AA seq
468 aa
AA seq
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MSTRRKVSLITLGCARNEVDSEELAARMEDAGWDLADGADGADVVVVNTCGFIEAAKKDS
IDTLLAAHDSGAKVVAAGCMAERYGKELAEALPEADAVLGFDDYAGIGERLDDVLAGRKR
DAHTPRNRRTLLPISPVERSSAQAAVPGHGDELPDGVAPASGPRVLRRRLGGGPVAPLKL
ASGCDRRCTFCAIPAFRGAYVSRPPAEVLEEARWLAGHGVRELVLVSENSTSYGKDLGDL
RALEKLLPGLAAVDGVERVRVSYLQPAETRPGLIEAICGTPGVAPYFDMSFQHASGPVLR
SMRRFGDRERFLGLLDQIRRLAPDAGVRSNFIVGFPGESEDDFEELAEFLIAARLDAVGV
FGYSDEDGTEAADLDGKLDPAEVAARVEELSSLAEELTAQRAEDRVGSEVRVLLEDKTED
GGVEGRAEHQAPEVDGTVLVRGEGLALGEIVTARVTGSDGVDLIADVS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactcgccgcaaggtctcactcatcacgctcggctgcgcccgcaacgaggtcgat
tccgaggagctcgccgcgcgcatggaggacgcggggtgggacctggccgacggggcggac
ggcgccgacgtggtggtcgtcaacacctgcgggttcatcgaggcggccaagaaggactcc
atcgacacgctgctggccgcgcacgactccggcgcgaaggtcgtcgccgccggctgcatg
gccgagcggtacggcaaggagctggccgaggcgctgccggaggccgacgcggtcctcggc
ttcgacgactacgccggcatcggcgagcggctcgacgacgtgctcgcgggccgcaagcgc
gacgcgcacaccccccgcaaccggcggacgctcctgccgatcagcccggtggagcggtcg
tccgcgcaggcggcggtcccggggcacggggacgagctgccggacggcgtggcccccgcg
tccgggccgcgggtgctgcggcggcgcctcggcggcgggccggtcgcgccgctgaagctg
gcgtccggctgcgaccggcgctgcacgttctgcgccatccccgcgttccgcggcgcgtac
gtgtcgcgtcccccggcggaggtgctggaggaggcccggtggctcgcggggcacggcgtc
cgcgagctggtcctggtgagcgagaactccacgtcctacggcaaggacctcggcgacctg
cgggcgctggagaagctgctccccggcctcgccgccgtggacggcgtcgagcgcgtccgg
gtcagctacctgcagcccgcggagacgcggccggggctcatcgaggcgatctgcggcacc
ccgggcgtcgccccctacttcgacatgtcgttccagcacgcgagcggcccggtcctccgc
tcgatgcggcgcttcggcgaccgggagcgcttcctggggctgctcgaccagatccgccgg
ctggccccggacgcgggggtgcggtccaacttcatcgtcgggttccccggcgagtccgag
gacgacttcgaggagctggcggagttcctgatcgccgcgcggctggacgcggtcggcgtg
ttcggctactccgacgaggacggcaccgaggccgcggacctcgacggcaagctggacccg
gcggaggtcgccgcgcgggtcgaggagctgtcgagcctggcggaggagctgaccgcgcag
cgcgcggaggaccgggtgggctcggaggtgcgcgtcctgctggaggacaagaccgaggac
ggcggcgtcgagggccgggccgagcaccaggccccggaggtggacgggacggtcctcgtc
cggggggagggcctcgccctcggcgagatcgtcacggcgcgcgtcaccggcagcgacggc
gtggacctgatagcggacgtgtcatga
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