KEGG   Actinomadura welshii: ACN3XK_43970
Entry
ACN3XK_43970      CDS       T10979                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
aws  Actinomadura welshii
Pathway
aws03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aws00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACN3XK_43970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aws03019]
    ACN3XK_43970
Messenger RNA biogenesis [BR:aws03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ACN3XK_43970
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_6
Other DBs
NCBI-ProteinID: XRQ03526
LinkDB
Position
complement(9625423..9627108)
AA seq 561 aa
MSHPHPDLSDPPAPPEGGLRIVALGGLGEIGRNMTVFEHAGRLLVVDCGVLFPETEQPGV
DLILPDFEYIRDRLDDIEAVILTHGHEDHIGAVPYLLRERRDIPLVGSKLTLALLEAKLT
EHRIKPVTDRVAEGERRSFGPFDCEFLAVNHSIPDALAVAVRTSAGLVLHTGDFKMDQLP
LDGRLTDLPGFARLGAEGIDLLMSDSTNSEVPGFVTSERNIGPVVDEVFRTAQERLIVAC
FASHIHRVQQVLDAAVANGRKVCFVGRSMVRNMGVARELGYLSVPDDIMVDQKELDDIPG
DRLVLVCTGSQGEPMSALSRMANRDHSIRITERDTVMLASSLIPGNETAVNRVINGLTRW
GARVVHKGNALVHVSGHASAGELLYVLNVTKPANFMPIHGEWRHLRAHSKLAALTGVPGE
NIVIAEDGVVVDLVDGRARIVGAVPAGYVYVDGLSVGEVTETSLKDRRILGEEGFVSIVV
GIDSTSGKLVAGPEVHARGAGILNEDFDEVIGRIEDVLRDAAGDGVNDLHQIHQMIRRTV
GKWVSDNYRRRPMIIPVVVEV
NT seq 1686 nt   +upstreamnt  +downstreamnt
gtgagccatcctcacccggacctctcggacccgcccgcgccgcccgagggcggcctgcgc
atcgtcgcgctcggcgggctgggggagatcggccgcaacatgaccgtcttcgagcacgcc
ggccggctgctcgtcgtcgactgcggcgtgctgttccccgagaccgagcagcccggtgtc
gacctgatcctgcccgacttcgaatacatcagggaccgcctggacgacatcgaggcggtc
atcctcacgcacggccacgaggaccacatcggcgccgtgccgtacctgctgcgcgagcgc
cgcgacatccccctcgtcgggtcgaagctgacgctggcgctgctggaggccaagctcacc
gagcaccgcatcaaaccggtcaccgaccgggtggcggagggcgagcggcgcagcttcggg
ccgttcgactgcgagttcctcgccgtcaaccactcgatcccggacgcgctggccgtcgcc
gtccgcacctccgccgggctggtgctgcacaccggcgacttcaagatggaccagctcccg
ctggacggccggctcaccgacctgcccgggttcgcccggctcggggccgagggcatcgac
ctgctgatgtcggactcgaccaactccgaggtccccggcttcgtcaccagcgagcgcaac
atcggcccggtcgtggacgaggtgttccgcaccgcgcaggagcggctcatcgtcgcctgc
ttcgcctcgcacatccaccgcgtccagcaggtcctcgacgccgccgtcgccaacggccgc
aaggtctgcttcgtcggccggtcgatggtccgcaacatgggcgtggcccgcgagctcggg
tacctcagcgtgcccgacgacatcatggtcgaccagaaggagctggacgacatccccggc
gaccgcctggtgctggtgtgcaccgggtcgcagggcgagccgatgtcggcgctgtcgcgg
atggcgaaccgcgaccactcgatccgcatcaccgagcgcgacaccgtgatgctggcgtcg
tcgctgatcccggggaacgagaccgcggtcaaccgcgtcatcaacgggctcacccggtgg
ggcgcccgcgtcgtccacaagggcaacgcgctcgtgcacgtgtccgggcacgcctcggcg
ggcgagctgctgtacgtcctcaacgtgaccaagccggccaacttcatgccgatccacggc
gagtggcggcacctgcgcgcgcactccaagctcgccgcgctgaccggcgtccccggcgag
aacatcgtcatcgccgaggacggcgtcgtcgtcgacctcgtggacgggcgggcccgcatc
gtcggcgccgtgcccgccgggtacgtgtacgtggacggcctgtcggtcggcgaggtcacc
gagacgtcgctgaaggaccggcgcatcctcggcgaggagggcttcgtctccatcgtcgtc
ggcatcgactccacgtcgggcaagctcgtcgccgggcccgaggtgcacgcccgcggcgcg
ggcatcctcaacgaggacttcgacgaggtcatcggccggatcgaggacgtgctgcgggac
gccgccggcgacggcgtcaacgacctgcaccagatccaccagatgatccgccgcacggtc
ggcaagtgggtgagcgacaactaccgccgccgcccgatgatcatcccggtcgtcgtcgag
gtctga

DBGET integrated database retrieval system