Actinomadura welshii: ACN3XK_44085
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Entry
ACN3XK_44085 CDS
T10979
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aws Actinomadura welshii
Brite
KEGG Orthology (KO) [BR:
aws00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aws03016
]
ACN3XK_44085 (truB)
Enzymes [BR:
aws01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACN3XK_44085 (truB)
Transfer RNA biogenesis [BR:
aws03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACN3XK_44085 (truB)
Prokaryotic type
ACN3XK_44085 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
XRQ03547
LinkDB
All DBs
Position
complement(9646578..9647459)
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AA seq
293 aa
AA seq
DB search
MQNSGNSGLVIVDKPAGWTSHDVVGRMRRLAGTRRVGHAGTLDPMATGVLVVGVGKATRL
LGHLALTEKGYDATIRLGESTNTDDAEGEVTATASAAAVTDAELHAGVAALTGPIRQVPP
QVSAIKVNGERAYRMARKGEEVALADRPVTVHEFAVTGVRRDGDVIDVDASVSCSSGTYI
RALARDLGASLGCGGHLTALRRTRVGPYDLAMARTLDRLAEKTEILPMGEAVAAVFPRRD
VSDDEARKVAHGGRLPAAGLGPGPVGVFAPDGSLLALVEEKGQVAKPLAVFVS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaactcgggcaactccgggcttgtcatcgtggacaagcccgccggatggacgtcc
cacgacgtcgtcggccggatgcggcggctggcggggaccaggcgcgtcgggcacgcgggc
acgctcgacccgatggcgaccggcgtcctcgtcgtcggggtcggcaaggccacgcgcctg
ctcgggcatctcgcgctgacggagaaggggtacgacgccaccatccggctgggcgagtcc
accaacaccgacgacgccgagggggaggtcaccgcgaccgcgtcggccgcggcggtcacc
gacgcggagctgcacgccggggtcgcggcgctgaccgggccgatccggcaggtcccgccg
caggtcagcgcgatcaaggtgaacggtgagcgggcctaccggatggcccgcaagggcgag
gaggtggcgctcgccgaccgcccggtgaccgtgcacgagttcgcggtcaccggcgtccgc
cgcgacggggacgtgatcgacgtggacgcgtccgtcagctgctcgtccggcacctacatc
cgcgcgctcgcccgggacctcggcgcgtccctgggctgcggggggcacctgacggcgctg
cgccgcacccgggtcgggccctacgacctcgcgatggcgcggacgctcgaccggctcgcc
gagaagacggagatcctgccgatgggcgaggccgtggcggcggtgttcccgcgccgggac
gtgtcggacgacgaggcccgcaaggtcgcgcacggcgggcggctccccgcggcgggcctc
ggcccgggaccggtgggcgtgttcgcccccgacggctcgctgctggccctggtggaggag
aaggggcaggtcgccaagcccctcgcggtcttcgtgtcctga
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