Actinomadura welshii: ACN3XK_60165
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Entry
ACN3XK_60165 CDS
T10979
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aws Actinomadura welshii
Brite
KEGG Orthology (KO) [BR:
aws00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aws03032
]
ACN3XK_60165 (topA)
03400 DNA repair and recombination proteins [BR:
aws03400
]
ACN3XK_60165 (topA)
Enzymes [BR:
aws01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACN3XK_60165 (topA)
DNA replication proteins [BR:
aws03032
]
Prokaryotic type
DNA Topoisomerases
ACN3XK_60165 (topA)
DNA repair and recombination proteins [BR:
aws03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACN3XK_60165 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
XRQ06563
LinkDB
All DBs
Position
complement(13044141..13046855)
Genome browser
AA seq
904 aa
AA seq
DB search
MPANNGTANSGRGNGAGTRLVIVESPAKAKTIAGYLGRGYIVESSIGHIRDLPGSASEVP
AKYKGESWAKLGVNVEHEFEPLYVVNADKRQQVQKLKKLLAEADELYLATDEDREGEAIA
WHLQEVLKPKVPVHRMVFNEITKDAIQQAAQNPRSLNLRLVDAQETRRILDRLYGYEVSP
VLWKKVMPKLSAGRVQSVATRLVVERERERIAFVPAHYWDIAAQFDTGRDEEPKAFKAGL
VSVDGKRVAQGRDFASDGTLKARDVLHLDEGAARGLAERLRGRPYEVKSVERKPYTRKPY
PPFRTTTLQQEASRKLNFSAKYTMSVAQKLYENGFITYMRTDSITLSETAITAARRQAAA
LFGAEYVPDKPRVYASKVKNAQEAHEAIRPAGETFRTPAETGLSGDQFRLYELIWKRTIA
SQMKDAAGQSVTIRVTGLSTRNERAEFSATGKTITFHGFLKAYVESADDPATDRDDQERR
LPNLAEGDPLTAAAVDAEGHSTRPPARYTEASLVKELEEREIGRPSTYAAIIGTILGREY
VFKKGTALVPSFLAFAVVNLLEQHFGNLVDYDFTAHMEDGLDEIARGEAERVRWLSRFYF
GDGENSEDGLKELVSDISDIDAKGVSSFPIKGTDIMVRVGRYGPYLDRDGERVNIPDDIA
PDELTAEKAEELFAQPSGDRELGTDPETGHTIVAKSGRFGPYVTEILPEAAPPAEGEKKK
RTKKADAAKPRTSSLFKSMSLDTITLDDALKLLSLPRTLGELDGEPVTAQNGRFGPYIKK
GTDSRSLGSEEELFTVTLEQAKELFAQPKQRGRRAAAAAPLRELGNDPSSGKPVVVKEGR
FGPYVTDGETNASLRKGDEVESITIQRAAELLAERREKVAASGGKKKPAKKTTTRRRTSA
KSGS
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
gtgccagccaacaacggcaccgcgaacagtggccggggcaacggcgccggtacccgcctg
gtgatcgtcgagtcgcccgcgaaggcgaagacgatcgccgggtacctgggtcgtggctac
atcgtggagtccagtatcggccatatccgggacctcccggggagcgcctcggaggtgccg
gccaagtacaagggcgagtcgtgggccaagctcggcgtgaacgtcgagcacgagttcgaa
ccgctgtacgtcgtgaacgccgacaagcggcagcaggtccagaagctgaagaagctgctc
gccgaggccgacgagctctacctcgcgacggacgaggaccgggagggcgaggcgatcgcc
tggcacctccaggaggtgctcaagccgaaggtccccgtgcaccggatggtcttcaacgag
atcaccaaggacgcgatccagcaggccgcccagaacccgcggtcgctgaacctgcggttg
gtggacgcgcaggagacgcgccgcatcctcgaccgcctctacgggtacgaggtcagcccc
gtcctgtggaagaaggtcatgccgaagctgtcggcgggccgggtgcagtcggtggcgacg
cggctggtcgtggagcgggagcgggagcggatcgcgttcgtccccgcccactactgggac
atcgcggcgcagttcgacaccggccgggacgaggagccgaaggcgttcaaggccgggctc
gtgtccgtggacggcaagcgggtggcgcagggccgcgacttcgcgtccgacggcaccctg
aaggcgcgggacgtgctgcacctggacgagggcgccgcccgcggcctggcggagcggctg
cgcggccggccgtacgaggtcaagtccgtcgagcggaagccgtacacgcgcaagccgtac
cccccgtttcggacgaccactctccagcaggaggccagccgcaagctgaacttctccgcg
aagtacacgatgtcggtggcgcagaagctgtacgagaacggcttcatcacctacatgcga
accgactcgatcacgctgtcggagacggcgatcacggcggcgcggcggcaggcggcggcg
ctgttcggcgccgagtacgtcccggacaagccgcgcgtgtacgcctccaaggtgaagaac
gcgcaggaggcgcacgaggcgatccgcccggcgggcgagacgttccgcaccccggcggag
acgggcctgtccggcgaccagttccggctgtacgagctgatctggaagcggacgatcgcg
tcccagatgaaggacgcggcgggccagtcggtgacgatccgcgtgaccggcctgtcgacg
cggaacgagcgcgccgagttcagcgcgaccggcaagacgatcacgttccacgggttcctc
aaggcgtacgtggagagcgcggacgacccggccaccgaccgcgacgaccaggagcggcgg
ctgccgaacctggcggagggcgacccgctgaccgcggccgccgtggacgcggagggccac
tcgacccgtcccccggcgcgctacaccgaggccagcctggtcaaggagctggaggagcgg
gagatcgggcggccgtcgacgtacgccgcgatcatcggcacgatcctgggccgcgagtac
gtgttcaagaagggcaccgcgctcgtcccgtcgttcctggcgttcgccgtggtgaacctg
ctggagcagcacttcgggaacctggtcgactacgacttcaccgcccacatggaggacggc
ctcgacgagatcgcccgcggtgaggccgagcgcgtccgctggctgagccggttctacttc
ggcgacggcgagaactccgaggacggcctgaaggagctcgtcagcgacatcagcgacatc
gacgccaagggcgtcagctccttcccgatcaagggcacggacatcatggtgcgggtcggg
cgctacggcccctacctggaccgggacggcgagcgcgtcaacatccccgacgacatcgcg
ccggacgagctgaccgccgagaaggccgaggagctgttcgcgcagccgtccggcgaccgg
gaactcggcaccgacccggagaccgggcacacgatcgtcgccaagtcggggcggttcggc
ccgtacgtcaccgagatcctcccggaggcggcgccgcccgccgaaggggagaagaagaag
cggacgaagaaggccgacgccgccaagccgcgcacgagctcgctgttcaagtcgatgtcg
ctcgacacgatcacgctggacgacgcgctgaagctgctgtcgctgccgcgcacgctcggc
gagctggacggcgagccggtcacggcgcagaacgggcggttcgggccgtacatcaagaag
ggcaccgacagccgttcgctcggctcggaagaggagctgttcacggtcacgctggagcag
gcgaaggagctgttcgcgcagccgaaacagcgggggcgccgggcggcggccgccgcgccg
ttgcgcgagctcggcaacgacccgtccagcgggaagccggtcgtggtgaaggagggccgg
ttcggcccgtacgtcaccgacggcgagacgaacgcgagcctgcgcaagggcgacgaggtc
gagtcgatcaccatccagcgggccgcggaactgctcgccgagcggcgcgagaaggtggcg
gcgagcggcgggaagaagaagcccgcgaagaagaccacaacgcgtcgccgaacctccgcg
aagtccggctcctag
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