Acinetobacter wuhouensis: BEN71_04615
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Entry
BEN71_04615 CDS
T05823
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
awu
Acinetobacter wuhouensis
Pathway
awu02020
Two-component system
awu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
awu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BEN71_04615
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BEN71_04615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
awu03021
]
BEN71_04615
Transcription machinery [BR:
awu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BEN71_04615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
IL7
HTH_IclR
Ribonuc_red_lgC
Motif
Other DBs
NCBI-ProteinID:
AXQ24051
LinkDB
All DBs
Position
835245..836696
Genome browser
AA seq
483 aa
AA seq
DB search
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLESNPLLEKVEEDTHESLES
IQQEQKETVELSDALNADHLPDELPVDTDWDDVYTHQSSAMERPEFEEREDNRHSDASLK
EHMLGQVNLLHFSPVDKLIAYCIVDALDEKGFLDASIDEIVSSVQHLLQQMDYDIEVEDD
EVLVVLKHIQRLEPIGVGARNLAECLFVQIEALPASTLYRKEALLLLKHYELLVSNDLAK
LIKQTGLNADLLKSAVMLLKTLKPYPGAEFEQKESDYQIPDVVVSKKNGHWLVQLNPDIL
PKLRINSFYSGMIKRADQSEDNQYLRNQMLEAKNFIKSVDERHKTLLKVASCIVQHQREF
LEIGAEGMKPLVLRDVAEEVELHESTVSRVTTNKFLLTPRGLFELKYFFSSHVGTTSGGE
ASSTAIRAKIKKLVAEENPRKPLSDNTIANLLKEDGIDVARRTVAKYRESLHIPSSSDRK
VLI
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatcggttggattaaaagttgcaaactctttgtcgctcacacctcaattgcaa
caagccattcgattgctacaattatcaagtcttgaacttgaacaagagattcaaatccaa
ttagaaagtaatcctttgcttgaaaaagttgaggaggatacgcatgaaagtttggaaagt
attcagcaagaacaaaaagaaacggtagaactttcagatgccttgaatgcagatcattta
cctgatgagttacctgtcgatacagattgggatgatgtttatacacaccaatcatctgcg
atggagcgtcctgaatttgaagaacgtgaagacaatcgtcattccgatgcctcattaaaa
gaacatatgttggggcaggtgaatctacttcacttttctccagtcgataagttaatcgcc
tattgtattgtcgatgctttagatgaaaagggctttttggatgcaagtattgatgaaatc
gtgagttcagtacaacatctacttcagcaaatggattatgacatcgaggttgaggacgat
gaggttttagttgttttaaagcatattcaacgtcttgaaccgattggtgtaggtgcacgt
aatctagcagaatgtctttttgtgcaaattgaagctttacccgcgagcactttatatcgt
aaagaagccttattattactgaaacattatgaattattagtgagtaatgatttagccaaa
ttgattaaacaaacagggttaaatgcagacttattaaagtcagccgtgatgttgttaaaa
acgctgaaaccttatcctggtgctgagtttgagcagaaagagtctgattatcaaattcca
gatgtggtggtgtctaagaaaaatggacattggcttgttcagcttaacccagacatttta
cccaagttgagaattaactcgttttattcaggcatgattaaacgtgcagatcaaagtgaa
gacaatcaatacttgcgtaatcaaatgttggaagctaaaaactttattaaaagtgtcgat
gaacgccacaaaactttattaaaagtggcgagttgtattgtgcaacatcaacgtgagttt
ttagaaattggtgcggaagggatgaaacctttggtattgcgcgatgttgcagaagaagtt
gaactgcatgaatcaactgtttctcgtgtcaccaccaataagtttttactgaccccccgt
ggtttgtttgagttgaaatatttcttttccagtcacgtcggaacaacttcaggaggcgag
gcttcatcaacggcaattcgagcgaaaattaagaagttggttgctgaggaaaatccacgt
aaaccattgtcagataatacgattgcaaatttattgaaagaggatggaatcgatgtggca
cgacgcacggtcgcaaaatatcgtgaatcgttacatattccttcatcatcagaccgaaaa
gtcttgatctag
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