Acinetobacter wuhouensis: BEN71_07155
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Entry
BEN71_07155 CDS
T05823
Name
(GenBank) DUF3418 domain-containing protein
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
awu
Acinetobacter wuhouensis
Brite
KEGG Orthology (KO) [BR:
awu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
awu03019
]
BEN71_07155
Enzymes [BR:
awu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BEN71_07155
Messenger RNA biogenesis [BR:
awu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BEN71_07155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
WHD_HA2
nSTAND3
ResIII
T2SSE
nSTAND_NTPase5
SRP54
SLFN-g3_helicase
NACHT
PhoH
NB-ARC
AAA_30
TsaE
AAA_23
PI-PLC_cat
DUF1128
Motif
Other DBs
NCBI-ProteinID:
AXQ21853
LinkDB
All DBs
Position
1355533..1359489
Genome browser
AA seq
1318 aa
AA seq
DB search
MPNQFNVDQLVMVRDRHRLSRLKKGKEANPEKFQELFEKSNHQVKKRFASLPTIKLNQDL
PVTQYADKLIEAIQNNQIIIVAGETGSGKTTQLPQIAMLAGRGLTGMIGHTQPRRLAARS
VSQRIAEEVGQKLGESISFKVRFNEQGSNDSIVRLMTDGILLAELSNDRYLNKYDTIIID
EAHERSLNIDFIMGYLKQIVKKRPDLKIIITSATLDVNRFSQYFNNAPIFEVEGRSFPVE
VVYRPISELTIGGSDDDDFDDFEENLPRAVVSAVEECFHDAESKGHPEHADILIFASTEQ
EIRELQETLHKFGPKHTQVLPLYARLALAEQQKIFNPLGGGRRIIIATNVAETALTVPNI
RYVIDSGFARISRYNYRSRVQRLPIEAVSQAAANQRKGRCGRIAPGVCIRLYSEEDFQSR
PEFTEPEIKRTNLASVILQMQSLGLGAVESFDFIEPPDHRLVNDGRKLLIELGAIRDEAS
EKSSPLAEKNSSPFEKGGGSPLSKRGVRGDLSQGELTKIGLQMAKMPIDPRLARMILGGA
HFGVLNEVLIIVAALAVQDPRERPADKQMQADQKHALFKEADSDFLFYIKLWNTLTENRE
NLSENKRRAFAKQHFLSWLRLREWKKTHEQLLDLAQGLKLSFNEKKANYENLHRALLTGL
LSFIANKTDERNVFMAVRQQKARIFPASTLHKTNTPWVMAFEMVETSQVYLRTLAKIEPE
WILLAAPNLLKHHYFEPHWAKKPGVVNAYDQISLFGLIIEPKRATNYEKVDQPAAHEIFL
RDALTTGNLGTTPPFLKHNLLKLEEVERVEDKLRRRDLVVDEETIYQFYASKVPAEIASR
RSFEDWRATIEPKNPRYLFVNDDDLWMNDRPTTQQFPDYLHNGQLRLAASYRFDPSHDED
GATVKIPVQALPQVDENIWSWGIPGWRSDLIEALLKALPKDKRRNLVPIPDTAKKLMKAV
DAQHLNAHIFDFLAFQLRGEQISAKDFSFERIEEYLIPLIKVIDEKGKLIEKGRDLSELK
ARCRTETHSPVKQLKGEFKTFPDKFVFEASQKVTGVVVKQYQALVVTKDFAKLDAKDESG
IVIQTFNDQNEAIKQHREGVIRLIHMQLGDLIRQLKKQISKPLALAYSPLGDKAKLEQML
VYATLQMSITDLPINAEEFDKLVIDVKQKFLSHGQDALRLISEIYIQWQEIRQKLLMVDQ
NVFAKNIDDMEDQLDLMNLSDFVYSKSSDVWQEYPRYLKALILRLERLPNNLNRDDDAIA
QIDPWMDKLFKFKNDDRLKELYFMVEELRISIFSQPMKTKMPISPTRLQKVWEKLGIS
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
gtgccaaatcagtttaatgtcgatcaattggtcatggttcgggatcgtcatcgtttaagt
cggctgaaaaaaggcaaagaggcgaatcctgaaaaatttcaagaattattcgaaaaatcc
aatcatcaggtcaaaaagcgttttgcaagtttacccaccattaaactgaatcaagacctg
cctgtaacccaatatgcagataaattgattgaagcgattcaaaacaatcaaattattatt
gtggcaggggaaacgggttcgggtaaaaccacacagcttccacagattgcgatgcttgca
gggcgtggtttaacaggtatgattggtcatacccaaccgcgtcgtttagcggctcgtagc
gtatcgcaacgtattgcagaagaagtgggacaaaagctcggggaatccatttcctttaaa
gttcgttttaatgagcaaggttcaaatgattcaatcgtccgtttaatgacggatggtatt
ctgcttgcagagctatccaatgatcgttatttaaataaatatgacactattattatagat
gaagcgcatgaacgttcactgaatatcgacttcatcatgggctatctcaaacaaatcgtt
aaaaagcgtcctgatttaaaaattatcattacttctgcaacgttggatgtaaatcgtttc
agtcaatattttaataatgcaccaatttttgaagtggaaggacgtagcttccctgtagaa
gtggtctatcgcccaatttcagaattgacgattggggggagtgatgatgacgatttcgat
gattttgaagagaatttacctcgtgcagtggtatcggcagtagaagaatgtttccatgat
gcggaaagcaaggggcatcctgaacatgcggatattttgattttcgcaagcaccgaacaa
gaaattcgagaattacaggaaactttacataaatttggtccaaagcatactcaagtttta
ccactgtatgcacgtttagcacttgctgaacagcagaaaatctttaatccattgggtggt
ggacgacgcattattattgccactaacgtagcggaaacagctttaactgtaccgaatatt
cgttatgtgattgatagcggttttgcacgtatttcacgttataactaccgttctcgtgta
cagcgtttaccgattgaagcggtatcgcaagcagcagccaatcagcgtaaaggacgttgt
ggtcgtattgcaccgggcgtgtgtattcgtttgtattctgaggaagatttccaaagtcgt
cctgaatttactgaacctgaaattaaacgtactaacttggcgtcagttattctgcaaatg
caaagtttaggtttaggcgctgttgaatcttttgattttattgagccacctgatcatcgt
ttggtgaatgatggtcgtaagttgctgattgagttgggggcgattcgggatgaagcctca
gagaaaagctcccctcttgcggagaaaaactcctcaccctttgaaaaagggggaggttcc
cctctttctaaaagaggggttaggggagatttatcacaaggcgaactcaccaaaatcggt
ctacaaatggcgaaaatgccgattgacccacgccttgctcgtatgattttaggcggtgcg
cattttggtgtgttgaatgaagtcctgattattgtcgcggcacttgcggtacaagatccg
cgtgaacgtcctgccgataaacaaatgcaagcggatcaaaagcatgcgttgtttaaagaa
gcggattcagactttttgttctatatcaaactgtggaatacactgactgagaaccgtgaa
aatttaagtgaaaataaacgccgtgcatttgcaaaacagcatttcttaagttggttacgt
ctacgtgaatggaagaagacccatgagcaattgcttgatttagcacaaggtttaaagttg
tctttcaatgaaaagaaagccaattatgaaaatctgcatcgtgctttattgacaggttta
ttgtcttttattgccaataaaaccgatgaacgcaatgtatttatggcagtgcgtcagcaa
aaagcccgaattttccctgcatcgactttgcataaaaccaatacgccgtgggtgatggca
tttgaaatggtggaaacttcgcaagtgtatttgcgaactttggcgaaaattgaacctgaa
tggattttattagctgctccaaatttattaaaacatcattattttgaaccgcattgggcg
aaaaagccgggtgtggtcaatgcttatgatcagatttcattattcggattaattattgag
ccgaaacgtgcgaccaattatgaaaaggtcgatcagcctgctgcacatgaaattttctta
cgtgatgcactgaccacaggcaacttgggaacaacgccaccatttttaaagcataatttg
ttaaaacttgaagaagttgaacgcgttgaggataaattgcgtcgtcgtgatttggtggtg
gatgaagaaaccatttaccaattctatgcttcgaaagtgcctgcggaaatcgcaagtcgt
cgtagttttgaagattggcgtgcgaccattgagccgaaaaatccacgttatttgttcgta
aatgatgatgatttgtggatgaatgatcgtccgactacacagcaatttcctgactatttg
cataatggtcaattgcgtttggctgcaagttatcgttttgatccaagtcatgatgaagat
ggtgcaacggttaaaattcctgtgcaagctttgccacaagtggatgaaaatatttggtcg
tgggggattccgggttggcgttcagatttgatcgaagctttactcaaagctttgccaaaa
gataagcgtcgtaatcttgtaccgattcctgatactgctaaaaagttgatgaaagcggtt
gatgcacaacatttaaatgcgcacattttcgatttccttgcatttcagttgcgtggcgaa
caaatttctgccaaagatttctcttttgaacgcattgaagaatatttgattccattgatc
aaagtgattgatgaaaaaggtaagttgattgaaaaagggcgtgatttaagcgagttaaaa
gcccgttgtcgcacagaaacgcatagccctgtgaaacaattgaaaggcgaatttaaaaca
ttccctgataagttcgtttttgaagcttcacaaaaagtcacaggcgtggtggttaaacaa
taccaagcacttgttgtcaccaaggactttgctaagctcgatgccaaagatgaatcaggt
attgtgattcagacttttaatgatcaaaatgaagccattaaacagcatcgtgaaggtgtg
attcgtttgattcacatgcaacttggtgatttgattcgtcagttgaaaaagcaaatttcc
aaacctttggctttggcgtattcgccattgggtgataaggcaaaattggaacagatgttg
gtctatgccaccttacaaatgtcgattacagatttaccgattaatgcagaagaatttgac
aaattagtcatcgacgtcaagcaaaaattcctgtctcatggtcaggatgcattgcgtctg
attagtgaaatttatattcaatggcaagagatccgccaaaaattactgatggtcgatcaa
aatgtctttgccaagaatatcgatgacatggaagatcaattggatttgatgaatttatct
gactttgtctatagcaaatcttccgatgtatggcaggaatatccacgttatttgaaagct
ttaatcttgcgtttggagcgtttgcccaataatctgaatcgagatgatgatgcaattgca
cagattgatccgtggatggataaactgtttaagtttaaaaatgatgatcgtttgaaagag
ctgtattttatggttgaagaattacgcatttcgatcttctctcaaccgatgaaaaccaag
atgccgatttcgccaacccgactgcaaaaagtttgggaaaagctcggaatcagttag
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