Alloalcanivorax xenomutans: P40_00020
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Entry
P40_00020 CDS
T04770
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
axe
Alloalcanivorax xenomutans
Brite
KEGG Orthology (KO) [BR:
axe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
axe03032
]
P40_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
axe03400
]
P40_00020 (gyrB)
Enzymes [BR:
axe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
P40_00020 (gyrB)
DNA replication proteins [BR:
axe03032
]
Prokaryotic type
DNA Topoisomerases
P40_00020 (gyrB)
DNA repair and recombination proteins [BR:
axe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P40_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
UFD1_N2
Motif
Other DBs
NCBI-ProteinID:
ARB43983
UniProt:
A0A9Q3W2Y8
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Position
3802..6216
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AA seq
804 aa
AA seq
DB search
MAENSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEI
KVTIHPDESVSVTDNGRGIPVDLHPEEGVSAAQVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSETLKLTIRRHGKVHEQVYHDGVPEKPLEVVGTTESSGTAIRFRPSSGTFNNI
QFHYDILAKRLRELSFLNSGVRIHLVDERSGDEDVFEYEGGLSAFVTYLNQNKNSLNQVF
HFQVDREDGISVEVAMQWNDSYQENIFCYTNNIPQRDGGTHLAGFRAALTRTLNNYMEKE
GFLKREKANPSGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKSAVEQTMTERFQDF
LLEHPVESKNIVQKIIDAARARDAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSEL
YIVEGDSAGGSAKQGRDRKYQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYDADKLRYHRIIIMTDADVDGSHIRTLLLTFFFRQMPELIVRGHIYIAQPPLYKVKKG
KQETYIKDDPALDEYLTTLALDKAALYPGNEAPPISGEPLSNLIGEYRKVMKLVERQSRV
FPAQVLEEMIYLPSIDEGKLEDEAFMVDWCAKLQERLANLGNNIQKFTISAEKDMERGLF
LPRVRVLAHGIVREYQVTLDFLESPDYQSIARLGETLEGLLADDAKVVRGEASRPIRDFA
EAMLWLMQQARRGINVQRYKGLGEMNADQLWETTMDPESRRMLQVTVEDAIAADQIFTTL
MGDDVDPRRQFIESNALYVSNLDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaacagctacgattcatccagcatcaaggttctcaagggcctggatgccgtt
cgcaagcggcccggcatgtatattggcgatacggatgacggcaccggcttgcatcatatg
gtcttcgaggtcgtggataactccatcgatgaagccctggcgggctactgtagcgagatc
aaagtcaccatccatcctgatgaatccgtttccgttacagataacggtcgtggtattccc
gtggatctccacccggaagaaggagtcagtgctgcgcaggtgatcatgacggtgctgcat
gccggagggaagttcgacgataactcctacaaggtttctggtggcttacatggcgtgggg
gtttcggtagtcaatgccctttctgaaactcttaagctgaccatccgccgccacggcaag
gttcacgagcaggtttaccatgacggagttccggagaagcctctggaagtcgttggaacc
acggaaagcagtgggaccgctatccgctttcggccatcttccggcaccttcaacaatatc
caattccactacgatatcctggccaaacgcctgagggagctgagcttcctgaattcgggt
gtccgcatccatcttgtggatgaacgcagtggtgatgaggatgtgtttgagtatgaaggc
ggactaagtgcctttgttacctatctgaaccagaacaagaattcgctgaatcaggtgttc
cacttccaggtggatcgtgaagacggcatcagcgtagaggtggcaatgcagtggaatgac
tcctatcaggagaacatcttctgctacaccaacaatattccacagcgggatggcggtact
cacctggccggatttcgggcggctttgacccggactctgaataactacatggagaaggaa
ggcttcctgaagcgggagaaagccaacccgtccggagacgatgcccgggaaggactaacc
gcgattatctcggtgaaggtgccagatccaaaattttccagccaaaccaaggacaaactg
gtgtcctcggaggtgaaaagcgccgtcgagcagaccatgacggagcgtttccaggacttt
ctgctggaacatccggtcgaatccaagaatatagttcaaaagattatcgatgcggctcgg
gcgcgggatgccgcacgcaaggcccgggaaatgacacgccgtaaaggggcgctggatatc
gccggattgcctgggaaactggcggattgccaagagaaagaccctgccctgtcggagctg
tatatcgtggagggtgattccgcgggcggatccgccaaacaaggtcgggaccgtaagtat
caggctatcttgccgttgaagggtaagatcctgaacgtggagaaggcccgctttgataag
atgctctcctcccaggaggtggcgacgctgattacggcattgggctgtggtatcggccgg
gatgagtatgatgcggataaacttcgctatcatcgcattatcatcatgacggatgcggac
gtggacggttctcacatccgtaccctgcttttgacgttcttcttccgtcaaatgccggaa
ctgattgtccgcggccacatttatattgctcagcctcctctgtataaggtgaaaaagggt
aagcaagaaacctatatcaaggacgaccccgccctggatgagtatctgactactctggct
ctagataaggccgcgctctaccccggtaacgaggcaccgccgatcagtggggagcctctg
tccaacctgattggcgaataccggaaagtcatgaagctcgtcgagcgtcaatcacgggta
ttcccggctcaggtgctggaggagatgatttatctgcccagcatcgatgagggcaagctg
gaagatgaggctttcatggtggactggtgcgctaaattgcaggagcgcctggccaatctc
ggaaataacatccagaagttcactatcagcgccgagaaagacatggagcggggcttgttt
ttgccacgtgtgcgagtactcgctcacggcatagtccgcgaatatcaagtcacgctggat
tttctggagtcgccggactatcaaagcatcgcgaggctgggggaaacactggagggcttg
ctggccgatgatgccaaggtggtcaggggcgaggcgagccgtccgatccgggatttcgcc
gaggccatgctatggctgatgcaacaggcccgccgcggtattaacgtacagcgctataaa
ggtctgggtgaaatgaacgctgatcaattgtgggaaaccaccatggacccggaatcccgt
cgcatgctgcaggtaaccgtggaagatgccatcgcggcggatcagatctttactaccctg
atgggtgatgatgtggacccccggcgtcaattcatcgagtccaacgctttgtacgtatcc
aacctggatatctga
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