Alloalcanivorax xenomutans: P40_02420
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Entry
P40_02420 CDS
T04770
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
axe
Alloalcanivorax xenomutans
Pathway
axe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
axe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
P40_02420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
axe03021
]
P40_02420
Transcription machinery [BR:
axe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P40_02420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_31
HTH_24
DUF1804
HTH_3
HTH_11
TetR_N
Motif
Other DBs
NCBI-ProteinID:
ARB47740
LinkDB
All DBs
Position
503172..503687
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AA seq
171 aa
AA seq
DB search
MTNAMQTDIGSLYRDHAHWLQGWLRRRLGGDGADAADLVQDTYVRLMVSGRFPAPEQSRA
FLARIANGLMIDMHRRRRLELAYREALAALPEESAPSAEQRAVTLETLTRVDQALDGLPS
KVREAFLCSRFEGLTYSRIAERLGVSHGSVRKYMLRAARSCLLALNELEPV
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgccatgcaaaccgacatcggttcgctgtatcgcgatcacgcccattggtta
cagggctggctgcgccggcgcctgggtggtgacggcgctgatgccgccgatctggtccag
gatacctatgtccggttgatggtctccggccgctttcccgcgccagagcagtcgcgagcg
ttcctggcccgcatcgccaatggcctgatgatcgatatgcatcgccggcgccggctggag
cttgcctaccgggaagccctggcggcactgccggaagaaagcgcgccttccgccgagcag
cgtgccgtgaccctggaaaccctgacccgcgttgatcaggccctggacggtctgccatcc
aaggtgcgtgaggcgtttctttgttcccgtttcgaggggctgacctatagccgcatcgcc
gagcggttgggcgtctcccatgggtccgttcgcaagtacatgctgcgtgccgcccggtcc
tgtctgctggcgctgaacgaattagaaccggtatga
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