KEGG   Alloalcanivorax xenomutans: P40_02420
Entry
P40_02420         CDS       T04770                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
axe  Alloalcanivorax xenomutans
Pathway
axe02020  Two-component system
Brite
KEGG Orthology (KO) [BR:axe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    P40_02420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:axe03021]
    P40_02420
Transcription machinery [BR:axe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     P40_02420
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_31 HTH_24 DUF1804 HTH_3 HTH_11 TetR_N
Other DBs
NCBI-ProteinID: ARB47740
LinkDB
Position
503172..503687
AA seq 171 aa
MTNAMQTDIGSLYRDHAHWLQGWLRRRLGGDGADAADLVQDTYVRLMVSGRFPAPEQSRA
FLARIANGLMIDMHRRRRLELAYREALAALPEESAPSAEQRAVTLETLTRVDQALDGLPS
KVREAFLCSRFEGLTYSRIAERLGVSHGSVRKYMLRAARSCLLALNELEPV
NT seq 516 nt   +upstreamnt  +downstreamnt
atgacgaacgccatgcaaaccgacatcggttcgctgtatcgcgatcacgcccattggtta
cagggctggctgcgccggcgcctgggtggtgacggcgctgatgccgccgatctggtccag
gatacctatgtccggttgatggtctccggccgctttcccgcgccagagcagtcgcgagcg
ttcctggcccgcatcgccaatggcctgatgatcgatatgcatcgccggcgccggctggag
cttgcctaccgggaagccctggcggcactgccggaagaaagcgcgccttccgccgagcag
cgtgccgtgaccctggaaaccctgacccgcgttgatcaggccctggacggtctgccatcc
aaggtgcgtgaggcgtttctttgttcccgtttcgaggggctgacctatagccgcatcgcc
gagcggttgggcgtctcccatgggtccgttcgcaagtacatgctgcgtgccgcccggtcc
tgtctgctggcgctgaacgaattagaaccggtatga

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