Alloalcanivorax xenomutans: P40_03635
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Entry
P40_03635 CDS
T04770
Name
(GenBank) protein hfq
KO
K03666
host factor-I protein
Organism
axe
Alloalcanivorax xenomutans
Pathway
axe02024
Quorum sensing
axe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
axe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P40_03635
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
P40_03635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
axe03019
]
P40_03635
03036 Chromosome and associated proteins [BR:
axe03036
]
P40_03635
Messenger RNA biogenesis [BR:
axe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
P40_03635
Chromosome and associated proteins [BR:
axe03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
P40_03635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ARB44627
UniProt:
A0A9Q3W2E8
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All DBs
Position
780306..780605
Genome browser
AA seq
99 aa
AA seq
DB search
MSKGHSLQDPFLNALRKERIPVSIFLVNGIKLQGQIESFDQYVVLLKNAVSQMVYKHAIS
TVVPARNPRASGGGNPAMHGTTGAAGGGQAGAGDEYGNQ
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagggcattcgctacaagacccttttctcaatgcgctgagaaaggaacgtatt
ccggtttctatctttctggttaacggaatcaaactgcaggggcaaatcgagtctttcgac
cagtacgtggtactgctgaaaaacgcggtaagccaaatggtgtataagcatgccatttcc
accgtggtgcccgcccgcaacccgcgtgcgtccggcggtggcaatccggccatgcatggc
accaccggtgccgccggcggcggccaggctggggcgggtgacgaatacggtaatcaatag
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