KEGG   Alloalcanivorax xenomutans: P40_03635
Entry
P40_03635         CDS       T04770                                 
Name
(GenBank) protein hfq
  KO
K03666  host factor-I protein
Organism
axe  Alloalcanivorax xenomutans
Pathway
axe02024  Quorum sensing
axe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:axe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    P40_03635
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    P40_03635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:axe03019]
    P40_03635
   03036 Chromosome and associated proteins [BR:axe03036]
    P40_03635
Messenger RNA biogenesis [BR:axe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     P40_03635
Chromosome and associated proteins [BR:axe03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    P40_03635
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: ARB44627
UniProt: A0A9Q3W2E8
LinkDB
Position
780306..780605
AA seq 99 aa
MSKGHSLQDPFLNALRKERIPVSIFLVNGIKLQGQIESFDQYVVLLKNAVSQMVYKHAIS
TVVPARNPRASGGGNPAMHGTTGAAGGGQAGAGDEYGNQ
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcattcgctacaagacccttttctcaatgcgctgagaaaggaacgtatt
ccggtttctatctttctggttaacggaatcaaactgcaggggcaaatcgagtctttcgac
cagtacgtggtactgctgaaaaacgcggtaagccaaatggtgtataagcatgccatttcc
accgtggtgcccgcccgcaacccgcgtgcgtccggcggtggcaatccggccatgcatggc
accaccggtgccgccggcggcggccaggctggggcgggtgacgaatacggtaatcaatag

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