Alloalcanivorax xenomutans: P40_07030
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Entry
P40_07030 CDS
T04770
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
axe
Alloalcanivorax xenomutans
Pathway
axe03410
Base excision repair
axe03430
Mismatch repair
axe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
axe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P40_07030
03430 Mismatch repair
P40_07030
03440 Homologous recombination
P40_07030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
axe03400
]
P40_07030
DNA repair and recombination proteins [BR:
axe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
P40_07030
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
P40_07030
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
P40_07030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
ARB47831
UniProt:
A0A9Q3W7Q4
LinkDB
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Position
1502386..1504083
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AA seq
565 aa
AA seq
DB search
MVRAFPTIRRRHVEIPAGLAEVPPLLARILAARGMSGAEELDLSLNRLPHPRQFGGLEQA
VALLLQARREHWRVCVVGDYDADGATATAVMVKGLQQLGFVRPDYLVPDRFEYGYGLSPA
IVDLARERYQPDLLITVDNGIASIDGVAAARAAGLRVLITDHHLPGDTLPDADAILNPRL
CEEGFPAANLAGVGVAFYVLMALQSALELRGRVVDLLDLVALGTVADVVVLDGANRILVE
QGLRRLRAGQGSPGVRALLRVAGRDPARVVAADLGFAAGPRLNAAGRLSDMSHGIECLLA
ESDAEAERHAQELDTINRERRGIEQGMREAAMAEVARLTGPTPPALCLHGDDWHEGVVGI
LASRVKEALNRPVIAFAPARQQGLLKGSGRSIPGLHLRDVLDAVATGHPGLLHKFGGHAM
AAGLTLERRHLAEFTTAFQAAVAAQADEDVFLDVIDTDGELGERDITLANAELLSHRFPW
GQGFPPPRFDGVFEVLNHRVVGERHLKLTLGLPDVGAAVDGIFFNAPVADLPSRIQRVEG
VYRLEVNEFRGQRNPQLLFEYLQVV
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
gtggtccgtgctttccccaccattcgccgccgtcatgtggaaatccccgccgggctggcc
gaggtgccgccgttgctggcacgaatcctggcggcgcggggtatgagcggcgccgaggag
ctggacctgagcctgaaccgcctgccgcacccgcgtcaattcggtggtctggagcaggcg
gtggcgctgctgctgcaagcgcggcgcgagcattggcgggtgtgcgtggtgggcgattac
gatgccgatggcgccaccgccaccgccgtgatggtaaagggcctgcaacagctcggcttc
gtccgtcccgactatttggtgccggaccgcttcgagtacggttacggcctgtcgccggcc
attgtcgacctggcccgggagcgttaccagccggatttgttgatcaccgtggataacggc
atcgccagtatcgatggcgtggcggcggcccgggccgccggtttgcgcgtgctgatcacc
gaccaccatttgcctggcgacacgcttcccgacgccgacgccattctcaacccccgtctg
tgcgaggagggctttcccgccgccaacctggccggcgttggcgtggccttctatgtgttg
atggcgttgcagagcgcgctggagctgcgcggccgggtggtggatttgctcgatctggtg
gcgctgggcacggtggcggacgtggtggtgctggacggtgccaaccgcattctggtggag
caggggctgcgccgtctgcgtgccggccagggttcaccgggggtgcgcgcgctgctgcgg
gtggcgggccgcgatcccgcgcgagtcgtggccgccgatctgggcttcgccgccgggccg
cgcctcaacgccgccgggcgtctctcggacatgagccacggcatcgaatgtctgctggcg
gagagcgacgccgaagccgaacgccacgcccaggaactggacaccatcaaccgcgagcgg
cgcggcatcgagcagggcatgcgcgaggccgccatggccgaggtggcgcggctcaccggg
ccgaccccgccggcgctgtgcctgcacggcgacgactggcacgaaggggtggtgggcatt
ctcgcctcgcgggtcaaggaggcgctgaaccggccggtgatcgcctttgctccggcccgg
cagcaggggctgctgaagggctccggccggtccattcccggcctgcatctgcgtgatgtg
ctggacgcggtggccaccggccatcctggtttactgcataagttcggcggtcacgccatg
gccgccgggctgaccctggagcgccgccatctggccgaattcaccacggcgttccaggca
gcggtggcggcccaggccgacgaggacgtgttcctggacgtgatcgacaccgacggcgaa
ctgggcgagcgggacatcaccctggccaacgccgaactgctcagccaccgttttccctgg
gggcagggcttcccgccaccgcgtttcgacggtgtgttcgaggtgctcaatcaccgggtg
gtgggcgagcgtcacctcaaactgactctggggttgccggacgtgggcgcggcggtggac
ggtattttcttcaacgcgccggtggcggatctgccctcccggatccagcgggtggaaggc
gtctaccggctggaagtcaacgaattccgcggccagcgcaatccgcagttgttgtttgag
tatttgcaggtggtgtga
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