Alloalcanivorax xenomutans: P40_15195
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Entry
P40_15195 CDS
T04770
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
axe
Alloalcanivorax xenomutans
Pathway
axe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
axe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P40_15195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
axe03019
]
P40_15195
03400 DNA repair and recombination proteins [BR:
axe03400
]
P40_15195
Enzymes [BR:
axe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P40_15195
Messenger RNA biogenesis [BR:
axe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P40_15195
DNA repair and recombination proteins [BR:
axe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P40_15195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ARB46586
UniProt:
A0A9Q3W849
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All DBs
Position
3330575..3332374
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AA seq
599 aa
AA seq
DB search
MQRDPLSILQHVFGYHEFRNQQAAIIDTLVSGGDALVLMPTGGGKSLCYQIPALAREGVG
VVVSPLIALMQDQVDALNALGVSAGFLNSTLDAGRARELEQQVRDGTLDLLYVAPERLTQ
ARTLELLHQSPLALFAIDEAHCVSQWGHDFRSDYLQLSLLHREFPQVPRIALTATADPRT
RQEIAERLDLGGARHFISSFDRPNIQYRIERKDSARQQLLRLIRNEHAGDAGIVYCLSRN
KVDQTADWLNQQGIPALPYHAGLGGEVRARHQQRFLREDGLVMVATVAFGMGIDKPDVRF
VAHLDLPKSIEAYYQETGRAGRDGAPATAWMAYGLEDAIRHKQMLAQSEGNEQFKRHEHQ
RLEAMLGLCEVTQCRRQALLNYFGETLEKPCGNCDTCLNPPQTFDATEVARKALSCVYRT
GQRFGVNHLVDVLTGNRSDKVASAGHDHVSTWNIGGELSANQWRAIYRQLVALGLLAVDA
AGYGALQLTEACRPYLRGERSLQLRKDVARAQTRSRRAERVPVTDAERPLWEALRACRKQ
LAEEAGVPPYVIFHDATLLDMMAIHPTSLRDMASVSGVGDRKLEAYGDAFLEVFHRYAS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgatcccctttcgattctccagcacgtattcggctaccacgagttccgtaac
cagcaggccgccattatcgacaccctggtcagcggtggcgatgccctggtgttgatgccc
accggcggcggcaaatccctctgttaccagatcccggccctggcgcgggaaggcgtcggt
gtggtggtcagcccgttgatcgcgctgatgcaggatcaggtggacgcgctcaacgccctc
ggcgtcagcgccggtttcctcaactccactctggacgccggccgcgccagggaattggaa
caacaggtccgcgacggtactctcgacctgctctatgtggcgccggaacggctgacccag
gcacgcactctggaattgttgcaccagtctccgctggcgttattcgccatcgacgaggcg
cattgcgtatcgcagtggggccatgatttccgcagcgactatctgcaactgtccctgctg
caccgggagttcccccaggtgccacgcatcgcgctcaccgccaccgccgatccgcgcact
cgtcaggagatcgccgaacggctggatctgggtggcgcccggcactttatctccagcttc
gaccggcccaacatccagtaccggatcgaacgcaaggacagcgcccgccagcaactgcta
aggctgatccgcaacgaacacgccggcgacgccggcattgtttattgcctgtcccgtaac
aaggtggaccagaccgccgactggctcaaccagcaaggcattcccgccctgccctaccac
gccggtctcggcggcgaggtgcgcgcccgtcaccagcagcgattcctgcgcgaggatggt
ctggtgatggtggccacggtggcgttcggcatgggcatcgataaaccggatgtgcgcttt
gtcgcccatctggatctgcccaaaagtatcgaagcctattaccaggaaaccggccgggcc
ggccgtgatggcgcccccgccaccgcctggatggcctatgggctggaagacgccatccgc
cacaaacaaatgctggcgcaatcggagggcaacgaacagttcaaacgccacgagcatcag
cgtctggaggccatgcttggcctctgtgaagtgacccagtgccggcgccaggcgctgctg
aactattttggcgaaaccctggaaaaaccctgcggcaactgcgatacctgcctgaacccg
ccacagacattcgacgccaccgaggtggcgcgcaaggcgctcagctgtgtttaccgcacc
ggccagcgattcggcgtcaaccatttggttgatgtgctcacgggcaatcgcagcgacaag
gtggcttccgccggccacgaccatgtctccacctggaacatcggcggcgagctttccgcc
aatcagtggcgggccatttatcggcaactggtggcgctgggcctgctcgccgtggatgcc
gccggctatggcgccctgcaactcaccgaggcctgccgtccctatttacgcggtgagcgg
tcgctacaactgcgcaaggacgtggcccgtgcccagacccgctcccgccgcgccgagcgg
gttccggtgacggacgccgagcgcccgctttgggaagccctgcgcgcctgccgcaagcaa
ctggccgaggaagccggcgtgccgccctacgtgatcttccacgacgccaccctgctcgac
atgatggcgattcatccaacctcactgcgtgacatggccagcgtcagcggtgtcggcgac
cgcaaactggaagcctacggcgacgctttcctggaagtgttccaccgttacgcctcgtga
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