Alloalcanivorax xenomutans: P40_19370
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Entry
P40_19370 CDS
T04770
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
axe
Alloalcanivorax xenomutans
Pathway
axe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
axe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
P40_19370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
axe03400
]
P40_19370
Enzymes [BR:
axe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P40_19370
DNA repair and recombination proteins [BR:
axe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P40_19370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PriA-like_WH
Zn_ribbon_6
AAA_30
AAA_19
AAA_22
HypA
Zn_ribbon_FGT1_1
Motif
Other DBs
NCBI-ProteinID:
ARB47290
UniProt:
A0A9Q3ZCF1
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All DBs
Position
4213679..4215877
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AA seq
732 aa
AA seq
DB search
MPLSTLQVALPVPLPGCFDYSLPPEMPVPPRGARVEVPFGKRTLVGVVHAHQPSSLKTLK
AVKRVLDEAPIIDERLYALCEWAAGYYHHPLGEVLNFVLPTLLRQGQAARPDAEIRWRIT
DRGRHVTADRLKRAPRQHEALALLAEHPDGLTPAMLEALSVSRPALQALREKQWAEREEH
LPQVPPLPADVLAEPALSASPEQRLAIEAINQASGFQPFLLDGVTGSGKTEVYLQAMAPV
LAAGRQVLVLVPEIGLTPQTLRRFRQRFAVPVTVMHSGLNDRERLEAWLAAGEGRARIII
GTRSAIFTPLHAPGLIIVDEAHDGSLKQQDGFRYHARDLATWRARQWNIPVVHGSATPAL
ETLHLAHTGRYQWLRLRERAGGAALPDIELLDARDAAPDAPLLPSALTAIEDTVRRGEQA
LVFLNRRGFAPVILCRDCGWQAECPRCDSVMTWHRSLSQLRCHHCDHQQRVPRRCPECGS
SNLIDAGAGTEKLEALLSDHCKAPVVRIDRDTTRRKGSLDAKLAEIRDGAPAVLVGTQML
AKGHHFPRLSLVVITNLDAGFLSADFRGPEQAAQLLLQVAGRAGRKDLRGRVLLQSRHTD
HHLVRLAAAGDYHALADTLLEERRMAGLPPFGHLALLRCEAMSMDKALAFLDECAAPFLQ
HSNVDDDSVNLLGPAPAPMEKRAGRYRAQLLLQAPQRPALHAVLDALVRHARSLPSARHC
RWHVDVDPTEMV
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
gtgccgctctccaccttacaggttgccttgccggtccccctgccaggctgttttgactat
tccctgccaccggagatgccggtgccgccccgtggcgcccgggtggaagtgccgttcggc
aaacggaccctggtgggcgtggtccacgctcatcagcccagcagcctgaagaccctcaag
gcggtcaaacgagtactcgacgaagcgccgatcatcgatgagcggctctacgccctgtgc
gaatgggccgccggctactatcaccatccccttggcgaagtattgaatttcgtgctgcca
acactgctgcgccaagggcaggcggcacggccggacgccgagatccgctggcgcatcacc
gaccgcggccggcacgtgacggcggaccgcctgaagcgggctccacgccaacatgaagcc
ctggccctgctggccgaacacccggacggcctcaccccggccatgctggaagcgctgtcg
gtatcgcgcccggcgctccaggccctgcgggagaagcagtgggcggagcgcgaggagcac
ctgccgcaggtaccaccgctgccagcggatgtcctcgccgagcctgccctgagcgccagt
ccggagcaacgactggcgatcgaggcgatcaatcaggccagcgggtttcaaccgttcctg
ctggacggcgtcaccggcagcggcaaaaccgaagtgtatctgcaagcgatggcgccggtg
ttggcggctggccggcaggtgctggtactggtgccggaaatcggcctgacgccgcagacc
ctgcgccgtttccgccaacgtttcgcggtgccggtgacggtcatgcattcaggcctgaac
gaccgcgaacggctggaagcctggcttgccgccggcgaaggccgggcacgcatcattatc
ggcacccgttcggcgatattcacaccgttgcatgcgccggggctgatcatcgtcgacgaa
gcccatgacgggtccctgaagcaacaggacggtttccgctaccacgcccgggacctggca
acgtggcgcgcccgccaatggaacattccggttgtccacggcagcgccactccggccctg
gaaaccctgcatctggcccacaccggccgttaccagtggctgcgtttgcgcgaacgggcg
ggcggcgccgcgctgccggatatcgagctgctggatgcccgggatgccgccccggacgcg
ccgctgctgccctccgctctgaccgccatcgaagacaccgtgcgccgtggtgaacaggct
ctggtgttcctcaaccggcgcggcttcgcgccggtgatcctgtgccgggactgcggctgg
caggcggagtgcccgcgctgcgacagcgtcatgacctggcatcgcagcttgtcgcagttg
cgttgtcaccactgcgatcaccagcagcgggtgccgcggcgctgcccggaatgcggctcc
agcaatctgatcgacgccggcgccggcacggaaaaactggaggccctgttaagtgatcat
tgcaaggcgccggtggtccgcatcgaccgcgacaccacccgccgcaagggcagtctggat
gccaaactggcggaaatccgggacggcgcgccggcggtgctggtgggcacacagatgctg
gcgaaaggtcaccatttcccccgtctgagcctggtggtgatcaccaatttggacgcgggc
ttcctcagcgctgacttccgcggccccgaacaggccgcgcaattgctgctgcaagtggct
ggccgcgccgggcggaaagatctgcgtggccgggtgctgctgcaaagccgccataccgat
catcatctggtgcgcctggccgccgctggcgactaccacgccctcgccgacacgctgctg
gaggaacggcgcatggccgggcttccgccgttcggccatctcgccttactgcgctgcgag
gccatgtccatggacaaggccctggcctttcttgatgagtgcgcggcgccctttctgcag
cacagtaacgtcgatgacgacagtgtgaacctgctcggaccggcgccggcgccgatggaa
aaacgggccggccgctatcgcgcccaactgctgctgcaggcgccccagcgcccggctctg
cacgccgtgctcgacgccctggtgcgtcatgcccgaagcttgccctccgcccgccattgc
cgctggcatgtggatgtggatcccaccgagatggtgtaa
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