Alloalcanivorax xenomutans: P40_19540
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Entry
P40_19540 CDS
T04770
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
axe
Alloalcanivorax xenomutans
Pathway
axe00300
Lysine biosynthesis
axe00470
D-Amino acid metabolism
axe01100
Metabolic pathways
axe01110
Biosynthesis of secondary metabolites
axe01120
Microbial metabolism in diverse environments
axe01230
Biosynthesis of amino acids
Module
axe_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
axe00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
P40_19540
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
P40_19540
Enzymes [BR:
axe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
P40_19540
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ARB47321
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Position
4251773..4253014
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AA seq
413 aa
AA seq
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MDHFPYRDGTLYVEELPLTLLAERFGTPLYVYSRAALETHYRAFDDAFGDHPHQVCYAVK
ANSNVAVLNVLARCGAGFDIVSGGELERVLRAGGDPDKIVFSGVGKTADEMARALQVGIH
CFNVESAAELELLNLVAGELGQEAPIAIRVNPDVDAQTHPYISTGLKENKFGVDIRKAPA
LYQRAAELPHIRILGIDCHIGSQLTRLEPFEDALERVLALLTELQELGIEIHHLDLGGGL
GVTYNDETPPAHEDYVAALLRHIPGELPVHIEPGRAIAANAGVFLTQVLFLKPTEHRNFA
IVDGAMNDLIRPSLYSAWQDIVPVTPHEADCRDWDIVGPVCETGDFLGKDRALALEAGDL
LAVRSAGAYGFAMASNYNSRGRPAEILVDGDQAFVVRQRETIEDQLKLETLLP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggatcactttccctaccgcgacggtaccctgtacgtcgaggaattgccgctgacactg
ctggccgaacgctttggcacgccgttgtatgtctattcccgggccgccctggagacgcac
taccgcgccttcgatgacgcctttggcgaccatccccatcaggtttgctacgcggtgaag
gccaacagcaatgtggcggtgctcaatgtgctggcccgctgcggcgccggtttcgacatc
gtctccggcggcgagctggagcgagtgctgcgtgccggcggcgatccggacaagatcgtc
ttctccggcgtcggcaagaccgccgatgagatggcccgtgccctgcaggtcggcatccat
tgcttcaacgtcgaatcggcggcggaactggaactgctcaacctggtggccggcgaactg
ggccaggaagcgcccatcgccatccgggtgaatccggatgtcgacgcccagacccatccg
tatatctccaccggcctcaaggaaaacaaattcggtgtcgacatccgcaaggcgccggcg
ttgtatcaacgggcggcggaactaccgcacatccggattctcggcatcgactgccacatc
ggcagccaactgacccgtctggagccgttcgaggacgcgctggagcgggtgctggcactg
ctgaccgaactgcaggaactgggcatcgagatccaccacctggatctgggcggcggtctc
ggcgtcacttacaacgacgaaacaccaccggcccacgaggattacgtggccgccctgctg
cggcacattcccggcgagttaccggtacacatcgaaccgggccgcgccatcgccgccaat
gccggcgtgttcctgacccaggtgctgttcctgaaacccaccgagcatcgcaacttcgcc
atcgtcgacggcgccatgaacgacctgatccgccccagcctctattccgcctggcaggac
atcgtgccggtgacgccccatgaggcggactgccgggactgggacatcgtcggcccggtg
tgcgaaaccggcgactttctcggcaaggaccgggccctggccctggaggccggcgacctt
ctggcggtgcgttccgccggcgcctacggtttcgccatggccagtaactacaacagccgt
ggccggccggcggagattctggtggacggcgatcaggccttcgtggtgcgccagcgggaa
accatcgaggatcagctcaagctggaaacgctgctgccctga
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