Alloalcanivorax xenomutans: P40_21300
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Entry
P40_21300 CDS
T04770
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
axe
Alloalcanivorax xenomutans
Pathway
axe03420
Nucleotide excision repair
axe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
axe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P40_21300 (uvrD)
03430 Mismatch repair
P40_21300 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
axe03400
]
P40_21300 (uvrD)
Enzymes [BR:
axe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P40_21300 (uvrD)
DNA repair and recombination proteins [BR:
axe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P40_21300 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
P40_21300 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ARB47634
UniProt:
A0A9Q3ZBQ4
LinkDB
All DBs
Position
complement(4634772..4636934)
Genome browser
AA seq
720 aa
AA seq
DB search
MDDVTSLLEGLNPAQRDAVAAEDRHLLVLAGAGSGKTRVLVHRIAWQIATEQASPFGILA
VTFTNKAAAEMRGRIEQLLAMPAGGMWVGTFHSIAHRLLRSHWQEARLPQSFEIIDADDQ
QRLVKRVIRELGLDEQRWPARQATWFINGQKDEGLRAAHMDVSGGDLFAATMQKIYLAYE
EACERAGLVDFNEMLLRVLELFRDNDDLRGHYQRRFRHILVDEFQDTNAIQYAWLRLLAD
EHNAVTIVGDDDQSIYGWRGAKIENIHRFSRDFPDTRVIRLEQNYRSTGTILEAANAVID
NNPDRLGKQLWTEDGKGDPIRLYAGFNEVDEARFIAGKVESLVQQGTNRNDMAVLYRSNA
QSRVLEEAFLQAGIPYRIYGGQRFFERAEIRNALAYLRLLNNRQADAAFERVVNTPTRGI
GNKTLEAVREQARLRGIPLWDAAVAIVNERLLSPRASNALLAFLQLVDQLAAQTETLDLA
ETTEHVIAASGLLDFHGQEKGDKGQQRVENLQELVSATRQFGEGDEESDLDPLTAFLDHA
ALEAGDGQAEAFEDAVQMMTLHSAKGLEFPVVFITGLEEGLFPHQMSSEEPGRLAEERRL
CYVGLTRAMRELYLTYAESRRLFGNETLNPPSRFLREIPGELVEEVRVRAAVSRPVGRRG
TVRQEEANGIGLGARVVHPKFGEGTVLHFEGQGPNARLQINFDGVGTKWLVSQYARLDVL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgtaacctcacttcttgaaggcctcaacccggcccaacgcgacgcggtcgcc
gcggaagaccgccatttgctggtgttggccggcgccggctccggtaagacccgggtgctg
gtgcaccgcatcgcctggcagatcgccaccgaacaggcctcgccgttcggtattctcgcg
gtcaccttcaccaataaggcggcggcggagatgcgcggccgcatcgaacagctgctggca
atgcccgctggcgggatgtgggtgggcaccttccacagcatcgcccaccgtctgctgcgc
tcgcactggcaggaggcgcgcctgccccagagcttcgagatcatcgacgccgatgaccag
cagcgcctggtcaaacgggtgatccgggagttagggctggatgagcagcgctggccggcg
cgccaggccacctggttcattaacggccagaaggacgaagggctgcgcgcggcgcacatg
gatgtcagcggcggtgatctgttcgccgcgaccatgcagaagatctatctggcctatgag
gaagcctgtgagcgcgccggcctggtggacttcaatgaaatgctgctgcgggtgttggag
ctgtttcgcgacaacgatgacctgcgcggccactaccagcgccgtttccgccatatcctg
gtggatgaattccaggacaccaacgccattcagtacgcctggctgcggttgctggccgat
gagcataacgcggttaccatcgtcggcgacgacgaccagtccatctacggctggcgcggc
gccaagatcgagaacattcatcgcttcagccgcgatttcccggacacccgggtaatccgt
ctggagcagaactaccgctccaccggcaccattctggaagcggccaacgcggtgatcgac
aacaacccggaccgtctcggcaagcagctgtggaccgaggacggcaagggggacccgatt
cgcctctatgccggtttcaatgaagtggatgaagcccgtttcatcgccggcaaagtggaa
agcctggtgcagcagggcaccaatcgcaatgatatggcggtgctgtaccgttccaatgcg
cagtcccgggtattggaggaggcgttcctgcaggccggcattccgtaccgtatttacggt
ggccagcgcttcttcgagcgggctgaaatccgtaacgccctggcttatctgcggttactc
aacaaccggcaggcggacgccgctttcgagcgggtggtgaacaccccgacccggggcatc
ggcaataagaccctggaggcggtacgcgagcaggcccgcctgcgcggtatcccgctctgg
gacgcggcggtggcgatcgtcaacgaacgcctgctcagcccccgggccagcaacgcgctg
ctggcgttcctgcagttggtggatcaactggcggcacagaccgagacgctggatctggcc
gagaccacggaacatgtgatcgccgccagcggcctgctggacttccatggtcaggaaaaa
ggggacaaaggccagcagcgggtggaaaacctgcaggagctggtgtccgccacgcgccag
tttggtgagggtgacgaggagtccgatctggacccgctcaccgccttcctcgatcacgcc
gccctggaggccggtgacggccaggcggaggcattcgaggacgcggtgcagatgatgacc
ctgcactccgccaaggggctggagtttccggtggtgttcatcaccggcctggaagaaggg
ctgttccctcatcagatgtcctcggaggagcccggtcggctggccgaggagaggagactc
tgttacgtggggctgacccgggcgatgcgcgagctgtatctgacctacgccgagagccgg
cgcctgttcggcaacgagacgctcaatccgcccagccgcttcctgcgagagattcccggt
gagctggtggaggaggtgcgggtgcgggcggcggtgagccggccggtgggccgccgtggc
acggtgcgccaggaggaagctaacggcatcggcctgggcgcgcgggtggtgcatcccaaa
ttcggagaaggtacggtattgcacttcgaagggcagggacccaacgcccgtctgcaaatc
aacttcgatggcgtggggaccaaatggctggtcagccagtacgcccgcctggatgtgctg
tag
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