Amphibacillus xylanus: AXY_03390
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Entry
AXY_03390 CDS
T02266
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
axl
Amphibacillus xylanus
Pathway
axl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
axl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXY_03390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
axl03019
]
AXY_03390
03009 Ribosome biogenesis [BR:
axl03009
]
AXY_03390
Enzymes [BR:
axl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AXY_03390
Messenger RNA biogenesis [BR:
axl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AXY_03390
Ribosome biogenesis [BR:
axl03009
]
Prokaryotic type
rRNA helicases
AXY_03390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
SUa-2TM
Stimulus_sens_1
SBF_like
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAM46471
UniProt:
K0J1X9
LinkDB
All DBs
Position
339058..340509
Genome browser
AA seq
483 aa
AA seq
DB search
MTTFQELNISAPILKALSNMGFEEATPIQEQTIPLGLKGEDVIGQAQTGTGKTAAFGIPM
IEQIEKKQRKIQGLVVAPTRELAIQVSEEIHRIGKFKGIRSLPIYGGQQMQRQIRSLKEG
PHIVVATPGRLLDHMRRKTINISDVKTIVLDEADEMLNMGFIDDIREILKMIPHERQTLL
FSATMPKEIRQIASTMMREPKEVKVKSKQLSVENIEQRFIEVHEKQKFDALTNLLDIHVP
ELAIIFGRTKKRVDELTDGLQARGFRAEGIHGDLTQGKRMSVLNKFKNGRIEILVATDVA
ARGLDISNVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAISFITPREMPHLKLIEKVTN
AKVKRMDMPTLADAKRGQQKIALKKLTRAIESQDLDDYREEAAALLEEYDSVTIVAATLK
MMTKERRQTPVTLSSVQPLSVKRSKDNRKNFRGKNDSNKKRQFGRKGKPAGRNRKFNNKR
ASK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttcaagaactaaacatttcagcgccaatcttaaaagcattaagtaatatg
ggctttgaggaagcaacgccgattcaggaacaaacaattccacttggcttaaaaggtgaa
gacgttatcggacaagcacagacaggtacagggaaaacagcagccttcggaatccctatg
attgaacaaattgagaaaaaacaaagaaagattcaagggttagttgtagcacctacacgt
gaacttgcaatacaagtatcagaagagattcaccgtatcggtaaatttaaaggcattcgc
tcacttcctatttatggcggtcaacaaatgcaacgccagattcgctcacttaaggaaggc
ccgcatatcgtagttgcaacaccgggtcgtctacttgatcatatgcgtcgaaaaacaatt
aatattagtgatgttaagacaattgtcttagatgaagctgatgaaatgctaaatatggga
ttcattgatgatattcgagaaatattaaaaatgattccgcatgagcgtcagacattactg
ttctcagcaacaatgccaaaagaaattcgccaaattgcatcaacaatgatgcgtgaacca
aaagaggttaaagtaaaatctaaacaattatctgtagaaaatattgagcagagatttatt
gaagttcatgaaaaacagaagtttgatgctttaacaaaccttttagacattcatgtacca
gaactagcgattatttttggtcgtacgaaaaaacgtgttgatgaattaacagatggcctt
caagctagaggctttcgagcagaaggtattcacggtgatttaactcaaggtaaacgaatg
agtgttttaaataagtttaaaaatggccgaattgaaattctagtggcaacagacgtagct
gcgcgaggcttggatatatcaaacgtaacacacgtttataactttgatattccgcaagac
ccagaaagttatgtacaccgaattggtcgtacaggaagagcgggtaaaacaggtgtagct
atttcatttattacaccacgtgaaatgccgcatttaaaactcattgaaaaagtgacaaat
gctaaagttaaaagaatggatatgccaacacttgcagatgcaaaacgtggtcagcaaaaa
attgcattgaagaaattaacaagagcaatcgaatcacaagatctagatgattatcgtgaa
gaagcagctgctttattagaagaatatgattcagttacaattgtagctgcaacattgaaa
atgatgactaaagaaagacgacaaacgcctgttacactttcttctgttcaaccattaagt
gtgaagcgcagtaaagataatcgtaagaatttcagaggtaagaacgactctaataaaaag
cgtcagtttggtcgaaaaggtaagccagctggacgtaatcgtaaatttaataacaaacgt
gcttcaaaataa
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