Amphibacillus xylanus: AXY_03540
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Entry
AXY_03540 CDS
T02266
Symbol
sigB
Name
(GenBank) RNA polymerase sigma-B factor
KO
K03090
RNA polymerase sigma-B factor
Organism
axl
Amphibacillus xylanus
Brite
KEGG Orthology (KO) [BR:
axl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
axl03021
]
AXY_03540 (sigB)
Transcription machinery [BR:
axl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AXY_03540 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GerE
Sigma70_ECF
HTH_23
HTH_3
TnsD
NirdL-like_HTH
DUF1492
IF2_N
Motif
Other DBs
NCBI-ProteinID:
BAM46486
UniProt:
K0J1Y9
LinkDB
All DBs
Position
352252..353040
Genome browser
AA seq
262 aa
AA seq
DB search
MTKSQPHNSREDEVYQWIEYLQENPKDEKTQEKIVLTYQNLVRSIARKYAKNSSIHEDLV
QVGMLGLLAAIRRYDSTLGKSFESFAIPTIIGEIKRFIRDKTWSVHVPRRIKELGPRIKR
ATEELTVMYQRSPTVAEIADYLDVSEEEVLETMEMGQSYKALSVDKKIEANSDGSTVSIL
DLIGDQDDNFERTDLRLLLEKVLPILSEREQKILQYTYFDNMSQKEAGDLLDISQMHVSR
IQRRALLKLREALQADGIGVID
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatctcaaccacacaatagtcgtgaggatgaggtttaccaatggattgagtac
cttcaggaaaaccctaaagatgagaaaactcaagaaaaaatcgtcctaacctatcaaaat
ttagttcgttcgattgcaagaaaatatgcaaaaaacagctctatccacgaagatctcgtc
caggtaggaatgctagggttgttagctgcaataagaaggtatgattctacattaggtaaa
tcctttgaatcattcgcaattccaaccattattggtgaaattaaacgatttatccgtgac
aaaacgtggagtgtccacgtaccacgccgaataaaggaactaggtccaagaattaagaga
gcgacagaagaattaactgttatgtatcaaaggtctcctactgttgcggaaatagcagat
tatttagacgtctcagaagaagaagtgcttgaaacaatggagatggggcaaagctataaa
gcattatcagtcgataagaaaattgaggctaactctgacggcagtacagtgtcaattctt
gatttgattggagatcaggatgataattttgaaagaactgatttacgacttttgttagaa
aaagtattacctatattgtcagaacgagaacagaagattttgcaatatacttattttgat
aatatgagtcaaaaagaggctggagatctccttgacatctcacaaatgcatgtttcgcgt
atccaacgtcgagcgttattaaaattaagagaagctttacaagcagatggaataggtgtt
atagactaa
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