Amphibacillus xylanus: AXY_04470
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Entry
AXY_04470 CDS
T02266
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
axl
Amphibacillus xylanus
Pathway
axl03420
Nucleotide excision repair
axl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
axl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AXY_04470 (pcrA)
03430 Mismatch repair
AXY_04470 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
axl03400
]
AXY_04470 (pcrA)
Enzymes [BR:
axl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AXY_04470 (pcrA)
DNA repair and recombination proteins [BR:
axl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AXY_04470 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
AXY_04470 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAM46579
UniProt:
K0IW42
LinkDB
All DBs
Position
459248..461488
Genome browser
AA seq
746 aa
AA seq
DB search
MMNQSIHPLLKGLNNRQQEAVRHTDGPLLVMAGAGSGKTRVLTHRIAYLLDEKDVSPRNI
LAITFTNKAAREMKDRVTNLIGPEADQMWVSTFHSMCVRILRRDADKIGINRNFTIFDTA
DQLTVIKNVLKERNIDPKKYQPRSFLAGISSAKNKLQTPDQYQKVAGDYFHKMVADVYQD
YQTTLLRNHSMDFDDLIMQTALLFKRAPEVLEYYQRRFQYIHVDEYQDTNYAQYDLVKKL
AEKYQNLCVVGDSDQSIYRWRGADIKNILSFEKDYPNATVVFLEQNYRSTESILNAANAV
IKNNPDHKEKKLWTDQAGGSKLKYYKAQTERYESLYVAEQIEKYIHEQRFNYRDIAILYR
TNAQSRVIEETFVKANIPYQMVGGTKFYDRKEIKDILAYLRLISNPDDDVSFVRIVNEPK
RGIGATTIEKLQNYATANEISLFTAIKEIDFVGLGARATKSLAEFGEMVSNWIQQQEFLT
ATDMVEQVLKKSGYEEMLENERTIEAKTRLENINEFKSVTKHFEKNSDDQTLLAFLTDLA
LISDIDSMDDDPFADNKVTMMTLHAAKGLEFPVVFLVGMEEGIFPHSRSAMDDEEMAEER
RLAYVGITRAEKELHLTHAVTRTLYGETKWNNMSRFIREIPEELLDGYTSTKKQPRFAIS
DDDRSFFAPKSTPKQQVTKRVAQKLTTGGEKEDWQVGDKAHHKKWGVGTIVRVTGKGEEL
ELDVAFPAPTGIKRLLAKFAPITKQS
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcaatctattcatcctttattaaaagggttaaataacagacagcaagaagcg
gttcggcatacggatggtccgcttttagttatggctggtgccggaagtggaaaaacacga
gtgctcacacaccggattgcgtatttactggatgaaaaagatgtatcaccacgaaatatt
ttggcaattacatttacaaataaagcagcacgagaaatgaaagatcgagtgacaaattta
atcggaccagaagcagaccaaatgtgggtatcaaccttccactcgatgtgtgttcgaatt
ttacgaagagatgcagataaaattggaattaaccgtaactttacgatttttgatacagca
gatcaattaacggttattaaaaatgtcttaaaagaaagaaatattgatccgaaaaagtac
caaccacgatcctttttagctgggattagctctgcaaaaaataaactccaaacaccagat
caatatcagaaagtcgctggtgactattttcacaaaatggtcgctgatgtttatcaagac
tatcaaacgactctcctcagaaatcattcaatggattttgatgacttgattatgcaaaca
gcacttttatttaagcgtgctcctgaagtccttgaatattatcaacgcagattccagtat
attcatgtcgatgagtatcaggataccaactatgcgcaatatgatctcgttaaaaaatta
gcagaaaagtatcaaaacctctgtgttgtaggtgattcagaccagtcgatttaccgttgg
cgtggtgctgatataaaaaatattttatcatttgaaaaagattacccaaatgcaacagtc
gtatttttagagcaaaattatcgctccactgaatcaatcttaaacgctgctaatgcggtg
atcaaaaataaccctgaccataaagagaaaaaactttggacagaccaagcaggcggatct
aagctaaagtattataaggcacagacagagcgctacgaaagcttatatgttgctgaacaa
attgaaaaatatattcacgaacagcgttttaattatcgagatattgccattttatatcga
acgaacgcgcaatcacgggttattgaagaaacatttgtcaaagcaaatattccttatcaa
atggtaggtggaactaagttctacgatcgtaaggaaattaaagatatccttgcttattta
agactaatatcaaaccctgatgacgatgtaagttttgtccgtatcgttaacgagccgaaa
cgaggaataggtgcaacgacgattgaaaaactacaaaactatgcaacggctaatgagatt
tcattatttacagccattaaagaaattgattttgtcggtttaggcgcacgagcaaccaaa
tccctagctgagttcggtgaaatggtaagcaattggattcaacagcaggaatttcttaca
gcaactgatatggttgaacaggtactaaaaaaatcaggctacgaagaaatgcttgaaaat
gaacgaacgattgaagcgaaaacgagactagagaacattaatgaatttaagtcagtaacg
aagcattttgaaaaaaatagtgatgatcaaacattacttgcatttctaactgacttggca
ttaatttccgatattgatagtatggatgatgatccatttgctgataataaagtaacaatg
atgactcttcacgcggctaaaggacttgagttccctgttgtgtttctcgttggtatggag
gaaggcattttcccacatagtcgatcagctatggatgatgaggaaatggctgaagaacga
cgacttgcttatgtggggatcacccgtgcagaaaaagagcttcacctaacacacgcagta
acgagaacattatacggtgaaacaaagtggaataatatgagccgctttattcgagaaatc
cctgaagaattattagacggctatacaagtacaaaaaagcaacctagatttgcgatttcg
gatgatgatcgaagcttcttcgcacctaagtcaacacctaaacaacaagtaactaaacgt
gttgcacagaaacttacgactggtggagagaaagaagactggcaagttggagacaaagcg
catcataaaaaatggggagtcggtacgatcgtgagggtgactggtaaaggtgaagagctt
gagttagacgttgctttcccagcacctacaggtattaaacgattactggcaaaatttgca
ccgataacaaaacaatcataa
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