Amphibacillus xylanus: AXY_09260
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Entry
AXY_09260 CDS
T02266
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
axl
Amphibacillus xylanus
Pathway
axl03030
DNA replication
axl03430
Mismatch repair
axl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
axl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AXY_09260 (dnaE)
03430 Mismatch repair
AXY_09260 (dnaE)
03440 Homologous recombination
AXY_09260 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
axl03032
]
AXY_09260 (dnaE)
03400 DNA repair and recombination proteins [BR:
axl03400
]
AXY_09260 (dnaE)
Enzymes [BR:
axl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AXY_09260 (dnaE)
DNA replication proteins [BR:
axl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AXY_09260 (dnaE)
DNA repair and recombination proteins [BR:
axl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AXY_09260 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BAM47058
UniProt:
K0J728
LinkDB
All DBs
Position
974441..977749
Genome browser
AA seq
1102 aa
AA seq
DB search
MSFVHLQVKSGYTFMHSTINLDQLVKKAKQDKMTAIALTDHNVLHGAIEFYQACKRENIK
PIIGMETSVVINDRVNELIILAKNNHGYQSLLKISSLIQTSDVKQISFNDLSTILTDCLI
ILPIGSTSLKGLIQNGDINAIQGFLNMWPVRPVVGVTRFELDLIQILHKSGVDLVALGDV
RYLEQTDQQAYRYLRAIDQKEKIFVKEDQPYRHFFTQSEASSYFQAYPDLLSQTVRIAEQ
CEVSFDLGQNHLPKFPVPEGYSSASYLKQLCLKSLNEKYSNQMREKAQQRLDYELSVIEK
MGFSDYFLIVWDFVRFAKSKGILVGPGRGSAAGSLVAYLLSITEIDPIEYNLLFERFLNP
ERISMPDIDIDFSDYRRNEVIEYVKQKYGHQSVAQIGTFGSFKTRSIIRELAKAFSLPKV
DLDFILGEIPAQGAGSITQAVKASKALLDYIQNHDHLKDFFKVARILEGLPRNMSTHAAG
VIIHDHPLVDFVPLISDGSGNQLTQFSMNDVERIGLLKMDFLGLRNLTTIERILKMVSRY
DAKEIDLEQIPLDDQKTYAIFQTGQTNGIFQFESQGMKRVLTRLKPTQFEDIVAVNALYR
PGPMDFIDTYINRKHKREKVNFPHNDLIPILATTYGVLIYQEQIIQIAHRFAGFSLGKAD
LLRRAVSKKNHDDLQGLKSDFINGSVSRGYTADLAEELFSWIVRFANYGFNRSHAVAYSK
IAYQLAYLKANYPVYFITELLNTVIGDQSKTIEYFKEAKQKKIKLLPPSINKSHYYYQPD
HGHIRMGLSSIKAIGYPIVNEIIQARQQGRFKSLFDFCMRVSLKIVNRGAIETLILAGAF
DEFGIERASLLASVDQAIEQGELFGGLEGEDSLFGDALNLEDDYQKVEPFELLEKLSFEK
ELLGVYISDHPLEVNRRHLRANGIMDFHYFYQQEQVKDIRFATLIQDINQIRTKRGDSMA
FVKLTDENFEVDGVIFPNLYREVKVMLSEQMFCLVTGKKDIRNGKEQLIIDQITPLDLAE
ISSIDSHSARLYLQVADAAKLKLAIHTLERLARRHPGPIEIIVHQKDQNQTFKLSEQYFI
SNHYEVLNELKKQFGTENVVLK
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgttcatttacaagttaaaagtggctatacttttatgcatagtacaataaat
ttggatcaactagttaaaaaagccaagcaagataagatgacggcgattgcgctaactgat
cataacgtccttcatggtgcgattgaattttatcaagcgtgtaaaagagagaacattaaa
cctataattggaatggaaacgagtgttgtgataaacgatcgggttaatgagctcattatt
ttggctaagaataatcatggttatcaatctttactcaaaatctccagtctaattcaaacg
agtgatgtcaaacaaatatcatttaatgatttatcaaccattttaactgattgtctgatt
attttaccgatcggatcaactagtttaaaagggttaattcaaaatggtgacatcaacgcc
attcaaggatttctaaatatgtggccagttagacctgtcgttggtgtgactcgctttgag
ctcgatttaattcaaatattacataaaagtggtgtagatttagtagcgcttggtgatgtt
cgttatttagaacaaaccgaccaacaagcctatcgctaccttagagcaattgatcaaaaa
gaaaaaatatttgttaaagaagatcagccttatcgacattttttcactcagagtgaagca
agctcatattttcaagcatatcctgatttactcagtcaaacagtaaggattgccgaacaa
tgtgaagtatcatttgatcttggtcaaaatcatttacctaaatttccggtaccagaaggc
tattcttcagcatcttatttaaaacaattgtgtcttaagtcattaaatgaaaaatattca
aatcaaatgagagaaaaagcacagcaacggttagactatgaactatctgtcattgagaag
atgggatttagtgattatttcttaattgtatgggattttgttcggtttgctaaaagtaaa
ggtattttagtagggccaggtcgaggttcagctgcaggatcattagtcgcttatttatta
tcgattactgagatcgatccaattgaatataatctattatttgaacgatttttaaatccg
gaaagaatctcgatgccggatattgatattgatttttcagattaccgtcgtaatgaagtg
attgaatatgtaaaacaaaaatatggacaccagtcagtggctcaaatcggcacattcggc
tcatttaaaacacgttcaattattcgggaacttgcaaaagcattttcattaccgaaagta
gatctagattttattctaggagaaatacctgcgcaaggggcaggatcaattacgcaagct
gttaaggcttcaaaagcattattagattatattcaaaatcatgatcatttaaaagatttt
ttcaaagtggcaagaatattggaaggtctacctagaaatatgtctacacatgctgcaggg
gttattatccatgatcatccattagtcgattttgttccactaatttcagatggttctggt
aatcaactgacgcagttttcaatgaatgatgtagaacgaattggtttactgaagatggat
tttttaggattacgtaatttaacaacgattgagcggattctaaaaatggtttcgcgatat
gatgctaaagagatagatttagagcaaattccattagatgatcagaagacttatgctatt
tttcaaactggacaaacaaacggtattttccaatttgaatcacaagggatgaaaagagta
ttaacacgcctaaaaccaacacaatttgaagatattgtagctgttaacgcactgtatcgt
ccagggccaatggactttattgatacgtatataaatcgtaaacataaacgggaaaaagtt
aactttcctcacaatgatttaatcccgattctagcaacaacgtatggtgtactgatttat
caagaacaaattattcagatcgcacaccgttttgctggttttagtttaggtaaggccgat
ttattacgccgagccgtttcaaaaaagaatcatgatgacttacagggtttaaaatctgac
tttattaatggaagtgtatcacggggctatacagcagatcttgctgaagagttattttct
tggattgtcagatttgccaattatggatttaaccgtagtcacgcagttgcatacagtaag
atagcgtatcagttagcttatttaaaggccaattatccagtctatttcattacagaatta
ctaaatacggtaattggtgaccagtcaaaaacgatcgagtattttaaagaagctaagcag
aaaaaaattaagctactcccgccatcaattaataaaagtcattattattatcaacctgat
cacggtcatattcgaatgggcttatcatcgattaaagcaatcggctatccaatcgttaat
gagattattcaagcgagacagcaaggaaggttcaagagtttatttgacttttgtatgcgt
gtctcactaaaaattgttaatcgtggtgcaattgaaactttaattttagcaggagctttt
gatgaatttggtattgagcgtgcttctttattagcatctgttgatcaagcgattgagcaa
ggtgagctgtttggtggacttgaaggagaagactcattatttggagatgcattaaacttg
gaagacgattatcaaaaagttgaaccatttgaattattagaaaagctcagctttgaaaag
gagttactcggagtttatatctctgaccacccacttgaagtgaatcgtcgtcatttacga
gcgaatggaattatggatttccactatttctatcaacaagagcaggtgaaagacattcgt
tttgctacattaatccaagatattaatcaaattcgcacgaagcgcggtgattcaatggcg
ttcgtaaagcttactgatgagaattttgaagtagacggtgttattttccctaatttatat
cgggaagtaaaggtgatgttaagtgaacagatgttttgtcttgtaacgggtaaaaaggac
atccgtaatggcaaagaacaactaattattgatcaaattacaccactagatttagctgag
atcagttcgatcgactctcattcagctcgtctatatttacaagtagctgatgccgctaaa
ctaaaattagctattcacacattggaacgactagctcgacgtcatccaggtccgattgaa
attattgttcatcagaaagatcaaaatcaaacatttaagttatcggagcaatattttatc
tcaaatcattatgaggtactaaatgaattgaaaaaacaattcggcacagagaatgttgtg
cttaaatag
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