Amphibacillus xylanus: AXY_09390
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Entry
AXY_09390 CDS
T02266
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
axl
Amphibacillus xylanus
Pathway
axl03030
DNA replication
axl03410
Base excision repair
axl03420
Nucleotide excision repair
axl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
axl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AXY_09390 (polA)
03410 Base excision repair
AXY_09390 (polA)
03420 Nucleotide excision repair
AXY_09390 (polA)
03440 Homologous recombination
AXY_09390 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
axl03032
]
AXY_09390 (polA)
03400 DNA repair and recombination proteins [BR:
axl03400
]
AXY_09390 (polA)
Enzymes [BR:
axl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AXY_09390 (polA)
DNA replication proteins [BR:
axl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AXY_09390 (polA)
DNA repair and recombination proteins [BR:
axl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AXY_09390 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AXY_09390 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BAM47071
UniProt:
K0J3A9
LinkDB
All DBs
Position
991094..993736
Genome browser
AA seq
880 aa
AA seq
DB search
MTDKQKLILIDGNSILYRAFFALPLLSNDKGVYTNAVFGFTKMLMKVLEEESPSHIMIAF
DAGKTTFRHAKYKDYKGGRQKTPPELSEQFLLVRELLDASSIVHYELEQYEADDIIGTLA
KKAAQANFNVQVITGDKDMLQLVSEDVHVQITRKGISELDIYTPEFLEEKLTIKPEQVID
MKALMGDSSDNIPGVTGVGEKTAIKLLNQFGTLENIYQNLDQVSGKKLKENLTNQKDLAF
LSKELVTINQDSPVEIELDQIAYKGYDQSRLTALFKDLGFKSLLSSLDGESSDESEQTET
LSPIDLKIISSFDEVKLTGTDAFTVEILEENYHTGEIIGFGLANDQGNYFIPTDVALGSD
QFKQWLEGSTKKKITFDAKKVMVSLRRYGIQVKGIIFDLLLASYLINPAENSHDIPAISH
RLGYQNLLFDEEVYGKGAKMSVPEQAIVADHVVRKAKALFQLQKDAEAKLQENEQESLFK
ELELPLASILADMESTGVKVDEKQLEVMQSELKARLSAIETEIHEQAGVAFNINSPKQLS
EILFEKLNLPVIKKTKTGYSTSADVLEKLEDKHPIIPSILLYRQLGKLQSTYIEGLLKVI
HDDKKIHTRFNQALTQTGRLSSVDPNLQNIPIRLEEGRKIRKAFIPSENDWIILAFDYSQ
IELRVLAHIANDEKLIEAFKSDRDIHTQTAMDVFNVTADEVDSLMRRQAKAVNFGIVYGI
SDYGLSQNLKITRKEAQAFIDQYFVSYPGVKQYMDDIVHKAKLDGYVTTLMNRRRYLPEI
TSRNFNQRSFAERTAMNTPIQGSAADIIKKAMIDLDHALKAGNFEARLLLQVHDELIIEA
PREEADKLLELVPKVMTETVTLNVPLKVDASQGESWYDAK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaacaaaaactgatattaattgatgggaatagtattttatatcgtgccttt
tttgcccttcctttattatcaaatgataaaggtgtttatacaaatgcagtatttggtttt
acgaaaatgctgatgaaagtattagaagaagaaagtccaagtcatatcatgattgctttt
gatgcaggcaaaacgacttttcgccatgcaaaatataaagactataaaggtggtcgacaa
aaaacgccacctgagttatcagagcaatttttattagtgagagagttgttagatgcgagc
tcaattgttcattatgagcttgaacaatatgaagcagatgatattattgggactctagct
aaaaaagcagctcaagctaactttaatgttcaagttattactggtgataaagatatgctt
caactcgtatctgaagatgttcatgtccaaattacgagaaaaggtattagtgagctagat
atttatacgccagaattccttgaggaaaagctaacgattaaacctgaacaagttattgat
atgaaagcactaatgggagatagttctgataacatcccaggtgtaacaggtgtcggtgag
aaaacagcgattaagctgttaaatcaatttggtactttagaaaatatctatcaaaacctt
gatcaagttagtggtaaaaagctaaaagagaatctaacaaatcagaaagacttagctttt
ctaagtaaagagttagtgacgattaaccaagattcacctgttgagatagaattagatcaa
attgcatataaaggctatgatcaatcaagattaacagcattatttaaggatttaggcttt
aaatcgttattaagttcacttgatggtgagtcaagtgatgaatcagaacaaacagagaca
ttaagcccaatcgatttgaagattatctcgtcatttgatgaggttaagcttactggaaca
gatgcgtttactgtggaaatcttagaagagaattatcatactggcgagattatcggcttt
ggacttgcaaatgatcaaggaaattactttattccaacagatgtcgcactaggatcagat
caatttaaacaatggcttgagggttcaacaaagaaaaagattaccttcgatgctaaaaaa
gtaatggttagcttaagacgatatggtattcaggtaaaggggattatctttgatttatta
ctggcttcatatttaattaatccagctgaaaatagtcacgatattccagcgattagtcat
cgattaggttatcagaatctgttatttgatgaagaagtatatggcaagggagccaaaatg
tctgtacctgagcaagcaattgttgctgatcacgtagtaagaaaagctaaagcattattc
caattgcaaaaagatgctgaggcaaaattacaagaaaatgaacaagaaagcctatttaaa
gaacttgaattaccactagcatcgatcttagctgacatggagtcaactggtgtaaaagtt
gacgaaaaacaattagaagtgatgcaaagtgaattaaaagcacgattaagtgcaatcgaa
acagagatccatgagcaagcaggagtggcctttaatattaattcaccgaaacagttaagt
gaaattttatttgaaaagcttaatcttccggttattaagaagactaaaacgggatattca
acatcagcagacgtattagaaaagcttgaggacaaacacccaattatccctagtatttta
ctatatcgtcagcttggcaaattacaatcgacatatattgaaggcttgctaaaagtaatt
catgatgataaaaaaattcacacacgatttaatcaggcgctaacacagactggccgctta
agttccgtagatccaaacttacagaacatcccaattcgattggaagaaggacgcaaaatt
agaaaagcgtttattccaagtgaaaacgattggattattttagcgtttgactattcacaa
attgaattaagagtattagctcatattgctaatgacgagaagctaattgaagcatttaaa
tcagatcgtgatatccatactcaaactgcgatggatgtctttaatgttacagcagatgaa
gttgatagcttaatgcgtagacaagctaaagccgttaactttggcatcgtttatggaatt
agtgattatggcttatcacaaaacttaaaaatcactcgaaaagaagcgcaagcatttatc
gatcaatactttgttagctaccctggagttaaacaatatatggatgatattgttcataaa
gcaaaacttgatggctatgtgacgacattgatgaatcgacgacgttacttacctgagatc
acgagccgaaactttaatcaacgtagttttgctgagcgtaccgcaatgaatacgccaatc
caaggaagtgcagctgacattattaagaaagcaatgatcgatttagatcatgcattaaaa
gccgggaattttgaagcacgcttattactacaagttcatgatgagttaattattgaagcg
ccaagagaagaagcagacaaattgttagagctagtaccgaaagtaatgactgaaacggtc
acattaaatgtgccgcttaaagttgatgcttcacaaggcgaatcatggtacgacgctaaa
tag
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integrated database retrieval system
