Amphibacillus xylanus: AXY_10470
Help
Entry
AXY_10470 CDS
T02266
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
axl
Amphibacillus xylanus
Pathway
axl03410
Base excision repair
axl03430
Mismatch repair
axl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
axl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AXY_10470 (recJ)
03430 Mismatch repair
AXY_10470 (recJ)
03440 Homologous recombination
AXY_10470 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
axl03400
]
AXY_10470 (recJ)
DNA repair and recombination proteins [BR:
axl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AXY_10470 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AXY_10470 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AXY_10470 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BAM47179
UniProt:
K0IXQ8
LinkDB
All DBs
Position
1096155..1098473
Genome browser
AA seq
772 aa
AA seq
DB search
MLASQMKWNFTYMEDDRKDQVDSEVNIVKQLLKNRGITGTKETNQFLNPQLTDLHQPHLL
NGLVESKQRIELAIDEGESILVFGDYDADGVTATTILVETLNELGAMCDYYIPNRFTEGY
GPNPEAFRQAKNQGFSLVITVDTGIAAFEAADTAKEIGLDLIITDHHEIQEELPTAYAII
HPKLSENYPFKDLAGVGVAFKLAEYLLGYFPTQFLDLVAIGTIADLVPLLSENRILTKYG
LDSLTNTDRPGLRALKEVASIKGEVDEQDIGFGIGPRLNAAGRLETAYPAVQLLLTRDPE
EAQALATEINLINQERQEIVSEIVDEAIEMVNQTQDINHSVIIVAKEGWNEGVLGIVASR
LVRIYQRPAICLALKPEDQIAKGSGRSIAAFDLFDSGMKIQDQFIRFGGHAQAIGLTIEL
DKVDELRTLLNNDAANQLAPEDFKEQLNIELSLDIDQLTLSTVNEINQLAPFGMGNPRPY
FYLKGHPQELKQIGAKNNHLKFTLAQDDQKLSAIAFGYGDYSSRISPHDQLEVVGELQIN
EWNGTRSLQLLVKDFQVQGYQLFDYRGSKFWHNQIQHLFDQEYLCLQFQNHPIESELEIT
QFDQLDQNQIPEVTDLVLLDLPKDLKQLSQLLSKIKPKNLYACYNLAGQKDWTAFPTRDD
FKWFYGFLIKRKAYNHKLEQKQVAGHTGWRVEKIEFIINVFYELKFVKIDNEVVSLNDSV
EKRQLTDSTYYQQGLKQKELQEVLYYSNYQQLKSWFISQVEDRVKEEEVNGL
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgagtcaaatgaagtggaattttacatatatggaagatgatcgcaaggatcaa
gttgattctgaggttaatatagtaaaacaattgttaaagaaccgtggaattactggaaca
aaagaaacgaaccagtttttaaatccccaattaactgatctacatcaaccgcatttgtta
aatggtctagtagaaagtaaacaacgaatcgaactagcaattgatgaaggtgaaagtatt
ttagtctttggtgattatgatgctgacggtgtaacagcaacaacgatattagtagaaaca
ttaaatgagcttggcgcaatgtgtgactactatattcctaatcgttttacagaaggctat
ggtcctaatccagaagcatttagacaagccaaaaatcaagggtttagtttagttattaca
gttgatactggaattgctgcgttcgaagcggctgatactgcaaaagaaattggattagat
cttattattacagaccaccatgaaattcaagaagaattacctactgcgtatgctattatt
cacccaaagctatctgaaaactatcctttcaaagatttagctggtgtaggcgtcgcgttt
aaattagcggagtatctgttaggttattttccaactcaatttcttgatttggttgccatt
ggaacaatagccgatcttgttcctttacttagtgagaaccgaattttaacaaagtatggt
ttggattccttaacaaacacagatcgtcctggtttgcgagccttaaaagaagtggcttca
ataaaaggtgaagtagacgagcaagatattggcttcggtattggaccacgattaaatgca
gccggtcgattggaaacggcctatcctgctgttcaattattacttacccgtgacccagaa
gaagcacaagctttggctacggagattaatttaattaaccaagaacgccaagaaatagta
agtgaaattgttgatgaagcaatagaaatggtaaatcaaacgcaagatattaatcattct
gtaattattgttgctaaggaaggctggaatgaaggcgttctaggtatagtagcatcgaga
ttggttcggatctatcaacgaccagctatttgtttagcgctaaaacctgaagatcagatt
gcaaagggttctggtcgtagtattgctgcatttgatctatttgatagtgggatgaaaata
caagatcaatttatacggtttggtggtcatgctcaagcgattggattaacaattgaactg
gataaagttgatgaattacgcacactattaaataatgatgcggccaatcagttagcacca
gaagattttaaagagcaattgaatatagagctaagtcttgatattgatcaattaacgtta
agtactgtaaatgagattaatcaattagctccttttggaatggggaaccctaggccttat
ttctacttgaaaggccatccgcaagaactgaaacaaataggtgcgaaaaacaatcactta
aaatttacattggcgcaagacgatcaaaaattatcagcaattgcttttggttacggtgac
tactcttcacgcatttcaccacatgatcaattagaagttgttggtgaattacaaatcaat
gagtggaatggcacgcgttcattacaattgctcgtcaaagattttcaggttcaaggctat
cagctttttgattatcgaggctctaaattttggcataatcaaattcaacatttatttgac
caagaatatctgtgtctccagtttcaaaatcatccgattgaatctgaattagaaataact
cagtttgatcaattagatcagaatcaaattcctgaggtaacagatttagttttacttgat
ttaccaaaagatttaaagcaattatcacaattattatcaaaaatcaaaccaaaaaatctg
tatgcatgctataatttagcagggcagaaagattggactgcttttccaacgcgagatgat
tttaaatggttttacggtttcttaataaaacgtaaagcgtataatcataaattggaacag
aaacaagtggctggccatactggttggcgagtagaaaagattgaatttatcataaatgtg
ttttatgaactaaagtttgttaaaatagataatgaagttgtttcattaaatgattcggta
gaaaaacgtcagttaactgattcaacatattatcaacaaggattaaaacaaaaagaatta
caggaagtactctattattcaaactatcaacaattgaagtcatggttcataagtcaagtt
gaagatagagtcaaggaggaagaagttaatggattataa
DBGET
integrated database retrieval system
