Amphibacillus xylanus: AXY_11260
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Entry
AXY_11260 CDS
T02266
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
axl
Amphibacillus xylanus
Brite
KEGG Orthology (KO) [BR:
axl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
axl03019
]
AXY_11260
03009 Ribosome biogenesis [BR:
axl03009
]
AXY_11260
Enzymes [BR:
axl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AXY_11260
Messenger RNA biogenesis [BR:
axl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AXY_11260
Ribosome biogenesis [BR:
axl03009
]
Prokaryotic type
rRNA helicases
AXY_11260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
SecA_DEAD
Helicase_RecD
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
BAM47258
UniProt:
K0J7B8
LinkDB
All DBs
Position
1178881..1180191
Genome browser
AA seq
436 aa
AA seq
DB search
MKKYDFKAINLNPWLEEVVDQLGFKQPTPIQQQVIPVALTGESIIGQSQTGSGKTHAFLL
PLFNQLELNKKEVQFVVTTPTRELASQIFDQVKKILALSGLEHQIQAKLFIGGTDKKRTI
EKLTEQPDIIVATPGRLLDLMNEGAISIYTARSFVVDEADLMLDLGLINEIDQILVKASP
SIQLLVFSATIPKRLQPFLKKYMENPTFIEIKDQISPNLLENRLVPLRHRNPAEIISQIA
QTIHPYLAIIFANGKEACDELYHELSQRGLNVGILHGGLSARERKRVVKDIQSLKYQYVV
ATDLAARGIDIEGVSHVINAQLPKEVEFFVHRVGRTARAGMEGTAIHLYTDQDRALLSKL
TEDGIEFSNYDIIKGEWREVKAWNNRKLRGNQKDDLDQEAWKRVKRPKKVKPGYKVKLRK
EQERIKRKLKKDKYRK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatacgattttaaagcaattaacttaaatccatggctagaagaagttgttgat
cagcttggttttaagcaaccgacaccaattcaacaacaagttatcccagtcgctttaaca
ggagaaagtattattggacaatcacagacgggatcaggaaaaacgcatgcattcctttta
ccgttatttaatcaattagaattaaataaaaaagaagtacaatttgtcgttacaacacca
acaagagaattagctagtcaaatttttgatcaagttaaaaaaatcttggcattatcagga
ttagaacatcaaatccaagctaaactgtttattggtggaacagataaaaaacgtacaatt
gagaaactaacggaacagcctgatattatcgtagcaactccaggacgtctattagacctg
atgaacgaaggcgcaattagtatatacacagctcgttcatttgttgttgatgaggctgac
ttaatgctagatttaggcctaatcaatgaaattgatcaaattttagtgaaagctagtcct
agcatacaattactcgtcttctctgcaacaattccaaaacgattacaaccattcttaaag
aaatatatggagaacccgacttttattgagattaaagatcaaatatcacccaatttatta
gaaaaccgcttagtaccgttacgtcaccgtaatccagcagaaataattagtcaaattgct
caaaccattcacccatacttggctattatttttgctaatggtaaagaggcttgtgatgag
ctttatcatgaattatcacagcgtggattaaatgttggtattcttcatggtggtctttcc
gcaagagagagaaaacgtgttgtaaaagatattcaatctctaaaatatcaatatgttgtt
gcaactgatttagctgcaagaggtattgatattgaaggtgttagtcatgtcattaacgca
caattacctaaggaagtggaattctttgtccatcgagttggccgaacagcacgtgcggga
atggaaggaactgcaattcatttatataccgatcaagatcgcgcacttctatctaaatta
acagaagatggtattgaattttctaattatgacattattaaaggcgaatggcgagaagtc
aaagcttggaataatcgaaaattaagaggaaatcaaaaagatgatttagatcaagaagcg
tggaaaagagttaaaagaccgaaaaaagttaaaccaggatataaggtaaaactacgtaag
gaacaagaacggatcaagcgtaaattaaaaaaagacaaatatcgaaagtag
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