Amphibacillus xylanus: AXY_14520
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Entry
AXY_14520 CDS
T02266
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
axl
Amphibacillus xylanus
Pathway
axl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
axl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXY_14520 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
axl03019
]
AXY_14520 (pnp)
03016 Transfer RNA biogenesis [BR:
axl03016
]
AXY_14520 (pnp)
Enzymes [BR:
axl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AXY_14520 (pnp)
Messenger RNA biogenesis [BR:
axl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AXY_14520 (pnp)
Transfer RNA biogenesis [BR:
axl03016
]
Prokaryotic type
tRNA degradation factors
AXY_14520 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
PCB_OB
SPATA25
S1_RRP5
OB_RRP5_4th
TrkA_C
Motif
Other DBs
NCBI-ProteinID:
BAM47584
UniProt:
K0IYP0
LinkDB
All DBs
Position
complement(1495168..1497285)
Genome browser
AA seq
705 aa
AA seq
DB search
MSNKQVFKTEIAGKPFIVEVGELAKQANGSCMVHYGDTSILATATGSKEPKDLPFFPLTV
NYEERLYAVGKIPGGFIKREGRPSEKAVLASRLIDRPIRPLFPEGFRNDVQVISMVMSVD
QNAPSEIAAMIGSSIALGVSDIPFNGPIAGVNIGRINGEFIINPTVEEREKSDMELTVAG
TKDAINMVEASANEVPEDVMLEAIMFAHEEIKRLVAFQEEIYQAVGKEKMEVALFNLDEE
LTLEVEKLAKDRLVSAIQTHEKLEREASIELVKKEVIETFENNEADEETINQVKDILDQI
VKDEVRRLITVEKVRPDGRTPEEIRPLSSRVNLLPRTHGSGLFTRGQTQVLSVCTLGALG
DVQILDGLDLEETKRFMHHYNFPHFSVGETGPIRAPGRREIGHGALGERALEKVIPSETE
FPYTIRLVSEVLESNGSSSQASICASTLALMDAGVPIKAPVAGIAMGLVKQGDDYTVLSD
IQGMEDFLGDMDFKVAGTEKGITALQMDIKIDGLAREILEEALQQARVGRLHILEHMTSV
IAEPKQELSTYAPKIITMTINPDKIRDVIGPSGKQINKIIDETGVKIDIEQDGSVYIASA
DQEMNEKAKSMIEEIVREAQVGELYLATVKRVEKFGAFAELFKGKEGLIHISELDTKRTN
KVEDVVKVGDQVMVKVIEIDRQGRINLSRKAVLVDEQKKQDEAKK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaacaagtttttaaaacagaaatagcaggaaaaccatttattgtggaagtt
ggagaattagctaagcaagcaaacggttcttgtatggttcactatggtgatacatcgatt
ttagctacagctacaggctcaaaagaacctaaggacttaccatttttcccattgacagta
aactatgaagaacgtctttatgcagttggaaaaatccctggcggatttatcaaacgtgag
ggacgtccaagtgaaaaagcagttttagcttctagattaattgatcgaccaatccgacca
ttattcccagaagggtttagaaatgatgttcaagtaatcagcatggtaatgagtgtagat
caaaatgcaccatcagaaattgctgcgatgattggctcatcaatcgcattaggtgtttca
gatattccatttaatggaccgatcgctggcgttaacattggccgaattaatggagaattc
atcattaacccaacagttgaagaacgtgaaaaaagcgatatggagttaacagttgctggt
acaaaagatgcgattaacatggttgaagcatcagcaaatgaagttcctgaagatgttatg
ttagaagcaattatgtttgctcatgaagagattaagcgtttagtagcattccaagaggaa
atttatcaagcagttggtaaagaaaaaatggaagttgctctctttaatttagatgaagaa
ctaactttagaagttgaaaagttagcaaaagatcgtctagttagtgcgattcaaacgcat
gaaaaattagagcgtgaagcatcgatcgaattagttaaaaaagaagttattgaaacattt
gaaaataacgaggctgatgaagaaacgatcaatcaagttaaagacattcttgatcaaatc
gttaaagacgaagtacgtcgcttaattacagtcgaaaaagttcgaccagacggaagaact
ccggaagaaatccgaccattatcatctcgagtaaatctattaccacgtacacacggatca
ggattatttacacgaggtcaaactcaagtattgtcagtatgtactttaggtgcactagga
gatgtgcaaattcttgatggtttagatttagaggaaacaaaacgattcatgcaccactat
aacttcccacactttagtgttggtgaaacaggaccaatccgtgctccaggaagacgtgaa
attggtcacggtgcattaggagagcgtgcccttgagaaggttattccatctgaaacagaa
ttcccatatacaattcgcttagtgtcagaggttttagaatcaaatggttcatcttcacag
gcaagtatttgtgcgtcaacattagcattaatggatgcaggtgttcctattaaagcacca
gtagctggtattgcaatgggtcttgtaaaacaaggcgatgattatactgttttaagtgat
atccaaggaatggaagacttcctaggagatatggactttaaagttgcaggtactgaaaaa
ggaattacagcattacaaatggatattaagattgatggtcttgcacgtgagattttagaa
gaagccttacaacaagcacgagttggacgtttgcatattttagagcatatgacaagtgtt
attgctgaaccaaaacaagaattgtctacgtatgcaccgaagataattacaatgacaatt
aatccggataaaatccgtgatgttattggaccaagtggtaagcaaattaataagattatc
gatgaaacaggcgttaaaattgatattgaacaagacggtagcgtgtatatagcatctgct
gatcaagaaatgaatgaaaaagctaagagcatgattgaagagattgttcgtgaagctcaa
gttggcgaactatacttagccacagtaaaacgtgtcgagaaattcggtgcatttgctgag
ctattcaaaggtaaggaaggacttatccatatctctgaattagatacaaaacgaacaaat
aaagttgaagatgtagttaaggttggcgatcaagtgatggttaaagttattgaaattgac
cgtcaaggccgaattaatttatcaagaaaagcagtcttagtagacgaacagaaaaagcaa
gacgaagctaagaagtaa
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