Amphibacillus xylanus: AXY_15130
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Entry
AXY_15130 CDS
T02266
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
axl
Amphibacillus xylanus
Brite
KEGG Orthology (KO) [BR:
axl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
axl03032
]
AXY_15130 (topA)
03400 DNA repair and recombination proteins [BR:
axl03400
]
AXY_15130 (topA)
Enzymes [BR:
axl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AXY_15130 (topA)
DNA replication proteins [BR:
axl03032
]
Prokaryotic type
DNA Topoisomerases
AXY_15130 (topA)
DNA repair and recombination proteins [BR:
axl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AXY_15130 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_2
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
BAM47645
UniProt:
K0IYQ0
LinkDB
All DBs
Position
complement(1552777..1554855)
Genome browser
AA seq
692 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKKYTVKASMGHVRDLPKSKMGIDFENNYQPNYITIRGK
GPVLKELRAAAKKAKKIYLAADPDREGEAIAWHLAHNLNVDPNSECRVVFNEITKEAVKD
SFKSPRPINMNLVDAQQGRRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVKMIIDREN
EIKNFKPEEYWSINGHFITNNEKFEGYFHRLDGAKQDLPNKASVDQVLERLTENKFKVTK
VTKKERKRNPALPFTTSSLQQEAARKLNFRARKTMMLAQQLYEGIDLGRSEGGITGLITY
MRTDSTRISETARSEASNYITDQFGSEYLGSAQKTKNSQQAQDAHEAIRPTSAFREPSKV
KDKLSRDQYRLYKLIWDRFIASQMAPAVMDTMTVQLEQNGVQFRATGSKIKFNGFMKIYI
EGNDDNVKEEHKLLPALEEGMEVDVDKITPNQHFTQPPPRYTEARLVKTMEENGIGRPST
YAPTLDTIQRRGYVTLDNKRFVPTELGEIVINLILEFFPKIIDIDFTAKMENDLDEIESG
AIDWIAVIDNFYQDFEKKLKVAEKEMENVEIKDEPAGEDCEKCGHEMVYKMGRFGKFMAC
SNFPDCRNTKAILKEIGVECPKCKKGQIVERKSKKRRTFYGCDQFPECDYVSWDKPISRQ
CPTCQEQLIEKKSKKGVTVQCSSCSYKEETQN
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattatttagtaatcgtggagtcacctgcaaaagctaaaactattgaacgctat
ctcggtaagaaatatactgtaaaagcttcgatggggcatgtgcgtgacttgccaaaaagt
aaaatgggtattgactttgaaaataattatcaaccgaattatataactatccgtggaaaa
ggtcctgttttaaaggaattgagagcagccgcaaaaaaagccaaaaagatatatttagca
gctgaccccgatcgcgagggtgaagcaattgcttggcatttagctcataacttaaatgtt
gatccgaattctgaatgtcgcgtcgtatttaatgagattacaaaagaagcagtcaaggat
tcttttaaatcacctcgacctattaatatgaatttagtcgatgcacaacaaggtcgacga
attttagatcgtttagttggttataacattagtcctttactatggaaaaaagtaaaaaaa
ggcttaagtgcaggacgtgtacaatctgtagcggtcaaaatgattatcgatcgagaaaat
gaaattaagaatttcaaaccagaagagtactggtcgattaatggtcactttattactaat
aatgaaaagtttgaagggtacttccatcgtctagatggggcgaagcaagatttacccaat
aaagcatcagttgatcaagtattagagcgacttactgagaacaaatttaaagtcactaag
gttactaagaaggaaagaaaacgaaatcctgctttaccttttacaacttcatcattacag
caagaagcggctagaaagctaaatttcagagctcgtaaaacaatgatgctagcacaacaa
ctatatgaaggaattgacttaggcagaagtgaaggtggcattactggtttgatcacatat
atgcgtacagattcaaccagaatttcagaaacagcgcgttctgaagcaagcaattatatc
actgaccaatttggttctgaatatttaggctctgcccaaaaaacgaagaattcacaacaa
gctcaggatgctcacgaagcaattcgtccaacttcagctttccgtgaaccgagtaaggtg
aaagataaattatccagagatcaatatcgactttacaaattaatctgggatcgatttatc
gcaagtcaaatggcacctgctgttatggatacgatgactgtccaactcgaacaaaatggc
gtgcaattccgagcgacaggttcaaaaatcaaatttaatggatttatgaagatctatatt
gaaggtaatgacgataatgttaaagaagaacataaattattaccagcattagaagagggc
atggaagtcgatgttgataaaattacaccaaatcaacattttactcaaccacctccacga
tatactgaggctcgtttagtaaaaacgatggaggaaaacggtattggtcgaccgtcgact
tatgcaccgacattagataccattcaaagacgtggctatgtcacattagataataaacgt
tttgtgccaactgaattaggcgagatcgtgatcaatttaattcttgagtttttccctaaa
attattgatattgatttcacggcgaaaatggaaaatgatcttgatgaaattgaatcaggg
gcaatcgattggattgcggtaattgataatttctatcaagattttgaaaagaaattaaaa
gttgctgagaaagaaatggaaaatgtcgaaataaaagatgaacctgctggtgaagactgt
gagaaatgcggtcatgagatggtctataaaatgggtcgattcggtaagttcatggcttgt
tctaacttccctgattgtcgtaatacgaaagcaattttaaaagagattggcgtagaatgt
ccaaaatgtaaaaaaggtcaaattgtcgagcgtaaatcgaaaaagagaaggactttctat
ggatgtgatcagttcccagaatgtgattatgtatcgtgggacaaaccaatctctagacaa
tgtccgacctgtcaagagcagttaattgaaaagaaatcgaaaaaaggcgttacggttcaa
tgtagttcttgtagttataaggaagaaacacagaattag
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