Amphibacillus xylanus: AXY_15930
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Entry
AXY_15930 CDS
T02266
Symbol
pbpB
Name
(GenBank) penicillin-binding protein 2b
KO
K08724
penicillin-binding protein 2B
Organism
axl
Amphibacillus xylanus
Pathway
axl00550
Peptidoglycan biosynthesis
axl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
axl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AXY_15930 (pbpB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
axl01011
]
AXY_15930 (pbpB)
Peptidoglycan biosynthesis and degradation proteins [BR:
axl01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AXY_15930 (pbpB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
TetR_C_41
Motif
Other DBs
NCBI-ProteinID:
BAM47725
UniProt:
K0IYV8
LinkDB
All DBs
Position
complement(1638966..1641107)
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AA seq
713 aa
AA seq
DB search
MKDSNNGNWKLNLLFGIFVALFLFIVGRFAFIQVTGEVQGVDLQEWANRQRTNYSEIPAR
RGYIVDRNGMQLAQDLTIYRLYAIVDEDFSPNPETRINHVANLEETANGIAPIIGMEAEE
VYSILKSGVDKGLFQVEFGRNGSQLSREQKEQIEALKLPGVHFIEEAKRYYPNGIFASQV
IGLAQTNDEHQITGITGIEAQLDDYLRGENGSISFHRDKYNTKLLNSNEVIVEAKDGYDV
KLTIDQKIQTILEDAMSYVEEMYEPERMTATVIDPKTGEILAMSNRPSYNPNNLGEVENW
YNDVVSTPIEPGSTVKAFTIAAAIEEGVYNPNETFKSGSFKIDQIERPITDWNQSWGMIT
YDEGFQRSSNVAMSKIVWDKLGPDRYLEYLRAFHFDQPTGIDLPREQAGTLLYRYPVEQL
TTSFGQGSTVTPIQVVKAATAIANDGKMMKPYVIKQITDPNTGEIVLEKEPEVVGEPISK
ETADQVLKAMESVITSNVGTGRNRYNLESYTVAGKTGTAQISGGSSGYLVGHENYIFSFL
GMAPSDDPKLIMYITVKQPKLEPYESGSDPVSYIFKHVMENGLHYLNIQPDKERNETYHD
FEMPDWKTMSKDALLSELANHELVPIVIGNGNQIVDANIEPGKQILSTHKLILMTDQPTM
PDLTGWSVRNVNEFVQLAGLDFEMIGSGFVSSQSILPDETLESGRYLFVEFNN
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatagtaacaacgggaattggaaattaaatttacttttcggtatatttgtcgca
ttatttttatttatagttggacggtttgcatttattcaggttacaggtgaggtacaagga
gtagatttgcaggaatgggcaaatcgacagcgaaccaattacagtgaaattcctgctcgt
agaggttacattgtagatcgaaatggcatgcaacttgcacaagatttgacgatttatcga
ttatacgcaatcgttgatgaagatttttcacccaaccctgaaacaagaataaaccatgtg
gcaaacttagaagaaacagctaatggaatagcaccgattattggtatggaagcagaagag
gtctattcaattctgaaatctggagttgataaaggcctttttcaagttgaattcggaaga
aatggcagtcaattaagtcgagaacaaaaagaacaaattgaagccttaaagctaccaggt
gttcattttattgaagaagcaaaaagatattatccgaatgggatttttgcatcacaagtg
attggcttagctcaaacaaatgatgaacatcagattacgggaattaccgggatagaggca
caacttgatgattatctaagaggagagaatgggtcaatttcttttcatcgtgataagtat
aatacgaagttgcttaactcaaatgaagtaatcgtagaggctaaggatggatatgatgtc
aaattaacgattgatcaaaagatccaaacgatcttagaagatgcgatgtcttatgttgaa
gagatgtacgagcctgagcgtatgactgcgactgtaattgatccgaaaactggagaaatc
cttgcaatgagtaatcggccatcctataacccaaacaatctaggagaagtcgaaaactgg
tataacgatgttgtttcaacaccaattgagccaggatcaacggtaaaggcattcactatt
gcagcagcgattgaagaaggtgtgtataatccgaatgagacatttaaatcaggctcattt
aaaattgatcagatcgaacgtccgattacagactggaaccaaagttggggtatgatcaca
tacgatgaaggttttcagcgttcatcaaacgttgctatgtctaagattgtctgggataaa
ttaggtccggatcgatatttagaatatttaagagcctttcattttgatcagccaactgga
atcgatcttccaagagaacaggctgggacattattgtaccgctacccagttgaacagcta
acgacatcatttgggcaaggttcaacagtgactccgatccaagtggtaaaggcagcgact
gcgatagctaatgatgggaaaatgatgaaaccatatgtcattaagcaaattactgatcct
aatacaggtgaaattgtattagagaaggaacctgaagtagttggtgaacccatttctaag
gaaactgccgatcaagtgttaaaagcaatggaatcagtcataacatcgaatgtaggtacg
ggtcgaaatcgttataatttagaatcctatactgtagcaggaaaaactggaacagctcaa
atttcaggaggatcatctggttacttagttggacatgagaattatatcttttcattttta
ggaatggcacctagtgatgatccgaagttaatcatgtatataacagttaagcagcctaaa
ttagaaccatacgaatctggttcggatccagtttcatatatttttaaacatgttatggaa
aatggacttcattacttaaatattcaacctgataaagagcgtaatgagacatatcacgat
tttgaaatgccagattggaagactatgtctaaggatgctttattatcagaattagcaaat
catgaacttgtaccaattgtgattggtaatggtaatcaaattgtagatgcaaatattgaa
ccaggtaaacaaattctatcgacgcataaactaattttaatgacagatcaaccgacaatg
cctgatttgactggttggtcagtaaggaatgtaaatgaatttgttcaattagccgggtta
gattttgaaatgattggttcaggctttgtctctagtcaaagtatcctaccggatgaaacg
ctagaatccggacgttatctctttgtcgaatttaataattaa
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