Amphibacillus xylanus: AXY_20840
Help
Entry
AXY_20840 CDS
T02266
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
axl
Amphibacillus xylanus
Pathway
axl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
axl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXY_20840 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
axl03019
]
AXY_20840 (recQ)
03400 DNA repair and recombination proteins [BR:
axl03400
]
AXY_20840 (recQ)
Enzymes [BR:
axl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AXY_20840 (recQ)
Messenger RNA biogenesis [BR:
axl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AXY_20840 (recQ)
DNA repair and recombination proteins [BR:
axl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AXY_20840 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAM48216
UniProt:
K0J5I1
LinkDB
All DBs
Position
2185425..2187206
Genome browser
AA seq
593 aa
AA seq
DB search
MRLIDAQKILQDYFGYADFRSGQKELLSLISEGKNTLGIMPTGGGKSLCYQIPGILLDGT
AIIISPLISLMKDQVDSLHTLGVKATYINSSLTSEEYNERMRLLSEGYYDLIYVAPERFD
SPFFLTTINKLQISFIAFDEAHCISQWGHDFRPSYRSIIDTINQLTQIPFRLALTATATQ
EVIEDIQRLLSIDDQSVVNTGFYRDNLHFHVVKGQNKQDFLINYISQHRQESGIIYAPTR
KLVESIHAKLIKEGFRAAYYHAGLAEDVRRNEQNRFINDQVEIMVATNAFGMGIDKSNVR
YVIHYSLPMNIEAYYQEAGRAGRDGEVSNCILLFSGQDSHLQSFLIEQSELDEEMKALEY
KKLRAMINYCHTDKCLPCYILDYFGEKNPYHDCGHCTNCTDQSEKVDRTRDAQMVLSCVM
RMEQRFGATLTAKVLKGSKDKKIKQFELDQLSTYGLMKERTEKQITEFIHFLVAEGYLST
GSDRFPILQLTQKAADVLKNKEQVWMRQTEIQQVAETDFDPELFERFRELRKQIATEEKI
PPYVVFSDATLKDLCRYLPKNKEEMLMIKGIGLKKYDSYGKAFLDIIKVHTNN
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttaatcgatgctcaaaaaattttacaagattactttggttatgccgatttcaga
tccgggcagaaagaattactttcactcatatctgaaggaaaaaatacgcttggaattatg
ccgacgggtggcggtaagtcactatgctatcaaatacctggaattttattagatggtacg
gcaatcattatttcaccgttaatttccttaatgaaggatcaggttgatagtttacatacg
ttaggtgtgaaggcaacttatattaatagtagcttaacgagcgaagaatataatgaacgg
atgcgtttgttaagtgaaggatattatgatttaatctacgttgctccagaacgatttgat
agtcccttctttctcaccacaattaacaaacttcaaatttcctttattgcctttgacgag
gcccactgtatctcacaatggggtcatgatttcagaccgagctaccgctcaataatagat
acgattaatcaactaacccagattccttttcgacttgccttaactgcgaccgcgactcag
gaagtcatcgaagatattcagcgtctactgtcaattgatgatcaatcagtggtgaatact
ggtttttaccgtgataatctacattttcatgttgtaaagggacaaaacaaacaagatttt
ttaatcaattatatttcacagcatcgacaagagtcagggattatttatgcgccaacacgt
aagctcgttgagtcgatccatgcgaaattaattaaggaaggttttcgtgctgcttattat
catgctggtttagctgaagatgtacggagaaatgagcaaaatcggtttattaatgaccaa
gtcgagatcatggtcgcaacaaatgcgtttggcatggggattgataagtcaaacgtgcgc
tatgtaattcattacagtctgccaatgaatattgaagcctactatcaagaagcgggccgc
gctgggcgtgatggtgaggttagtaactgtattctattattctcaggtcaagacagccac
ttacaatcatttctgatcgagcaatcagaattagatgaagaaatgaaagcactcgagtat
aaaaagctacgagcgatgataaattattgtcatacagataaatgtctaccttgctatatt
ctagattactttggtgagaaaaatccttatcatgactgtggtcactgcacaaattgtact
gatcaaagcgaaaaggttgatcgcacacgtgatgctcaaatggtattatcatgtgtgatg
cgaatggaacagcgatttggcgctactttaacggccaaggtactgaaaggttcaaaagat
aaaaaaataaaacaatttgagcttgatcaattatctacttatggattaatgaaggagcga
accgaaaagcaaattactgaatttatccatttcctcgtcgcagaaggctatttatcgaca
ggaagtgatcgcttccctattttacagcttacacaaaaagcagctgatgttctgaaaaac
aaagaacaggtgtggatgcgtcagacagaaatccaacaagtagcagaaacggattttgat
ccagagttattcgaacgatttcgtgagttacgtaaacaaattgcaacagaggaaaagatt
ccaccttatgttgttttttcagatgcaacattaaaagacctttgccgttacttgcctaag
aacaaggaagaaatgctaatgattaaaggaattggtttgaagaaatacgattcatatgga
aaagcatttttagacattattaaagttcacacaaataactag
DBGET
integrated database retrieval system
