Achromobacter xylosoxidans NBRC 15126 = ATCC 27061: AX27061_1045
Help
Entry
AX27061_1045 CDS
T02964
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
axn
Achromobacter xylosoxidans NBRC 15126 = ATCC 27061
Pathway
axn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
axn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AX27061_1045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
axn03019
]
AX27061_1045
Enzymes [BR:
axn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AX27061_1045
Messenger RNA biogenesis [BR:
axn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AX27061_1045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
LBP_BPI_CETP_C
Motif
Other DBs
NCBI-ProteinID:
AHC45511
LinkDB
All DBs
Position
1126618..1128063
Genome browser
AA seq
481 aa
AA seq
DB search
MTESTQSAAPAAAPAPTPTFSDFGLHPLLLQSIAETGYTTPTPIQAQAIPVVVEGRDVMG
AAQTGTGKTAAFTLPILHRLMPLANTSASPARHPVRALILTPTRELADQVYESVKRYSKQ
TPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVEQKNVNLSQVGILVLDEADRM
LDMGFLPDLERIIRLLPAQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAARNATANTIT
QIAYKMSGDQKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARELERDGVKAESIHGDKTQ
ADRMKALEAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGA
TGEAIALFTADEERFLLDIEKLIKREVPRGTLDVPAELVARSHGRREERGSSSREGGRER
GRSSERRSGGGASRQPVDDFFLKPYEPSAPSAPAEEQAPRQNGNSSAPKRQLAVLLGGSR
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatccactcaatccgcagcacccgccgccgcgcccgcgccgacgcccacgttt
tccgatttcgggctgcatcccctgctgttgcaatcgatcgccgaaaccggctacaccacg
cccaccccgatccaggcgcaagccattcccgtcgtggtcgaagggcgtgatgtcatgggc
gcggcccagaccggcaccggcaagaccgcggcgttcacgctgccgatcctgcaccgcctg
atgccgctggccaataccagcgcttcgcccgcgcgccatccggtgcgcgcgctgatcctg
acgccgacgcgcgagctggccgaccaggtctacgaaagcgtcaagcgctacagcaagcag
acgccgctgcgttccgccgtggtgttcggcggcgtcgacatcgggccgcagaaggaagcg
ctgcgccgtggttgcgaagtgctggtggccacgcccggccgcctgctcgaccacgtcgag
cagaagaacgtcaacctgagccaggtcggcatcctggtgctggacgaagccgaccgcatg
ctggacatgggcttcctgcccgatctcgaacgcatcatccggctgctgcccgcgcagcgc
cagggcctgctgttctcggccaccttcagcaacgagatccgcaagctgggccgttcctac
ctgaatcacccggtggaaatcgaagtcgcggcgcgcaatgccacggccaacaccatcacg
cagatcgcctacaagatgagcggcgaccagaagcgcgccgcggtggtgcacctggtgaag
tcgcgaggcctcaagcaggtcatcgtgttctcgaacaccaagatcggcacggcgcgcctg
gcgcgcgaactcgagcgcgacggcgtcaaggccgaatctatccacggcgacaagacccag
gccgaccgcatgaaggcgctcgaggccttcaaggccggcgaactcgaagtgctggtggcc
accgacgtggccgcgcgcggcctcgacgtcgccggcgtgccttgcgtcatcaactacgac
ctgccgtacaacgccgaagactacgtgcaccgcatcggccgtaccggccgcgccggcgcc
acgggcgaagccatcgccctgttcaccgccgacgaagaacgcttcctgctcgacatcgag
aagctgatcaagcgcgaagtgccgcgcggcacgctcgacgtgccggccgaactggtcgcg
cgcagccatggccgccgcgaggaacgcggttcgtcgtcgcgcgaaggcggccgtgaacgc
ggccgctcttccgagcgccgctcgggcggcggcgcttcgcgccagccggtggacgacttc
ttcctcaagccctacgaaccgtcggctccgtcggcgccggccgaggaacaggcgccgcgc
cagaatggcaattcgtccgcgcccaagcgccagcttgccgtgttgctgggtggcagccgc
aagtag
DBGET
integrated database retrieval system
