Achromobacter xylosoxidans NBRC 15126 = ATCC 27061: AX27061_1289
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Entry
AX27061_1289 CDS
T02964
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
axn
Achromobacter xylosoxidans NBRC 15126 = ATCC 27061
Pathway
axn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
axn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AX27061_1289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
axn03019
]
AX27061_1289
03016 Transfer RNA biogenesis [BR:
axn03016
]
AX27061_1289
Enzymes [BR:
axn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AX27061_1289
Messenger RNA biogenesis [BR:
axn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AX27061_1289
Transfer RNA biogenesis [BR:
axn03016
]
Prokaryotic type
tRNA degradation factors
AX27061_1289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
KH_SLS1_2
S1_RRP5
DUF5813
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
AHC45754
LinkDB
All DBs
Position
1391547..1393703
Genome browser
AA seq
718 aa
AA seq
DB search
MFNKVTKSFQYGQHTVVLETGEIARQASGAVVVSIEDTVVLATVVASKKAKPGQTFFPLT
VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPLRPLFPEDFYNEVQVVIHTLSV
NPEIDPDIAAMIGASAALAISGIPFNGPIGAARVGYIDGQYAINPTASQLKSSKLDLVVA
GTENAVLMVESEADQLSEEIMLGGVVYGHEQMQAVINAIHELVKDAGKPDWDWQAPAKDE
ALIAAVTSAAQEGLNAAYQIREKQARTTKLREVYADVSAKLNAAAAEKGEPAPDAVTVDN
ILFSLESAIVRGQILNGEPRIDGRDTRTVRPISVRLGVLPRAHGSALFTRGETQALVVAT
LGTKQDEQIIDALMGEYRDRFMLHYNMPPFATGETGRIGVPKRREIGHGRLAKRALIPLL
PAPEDFQYTIRIVSEITESNGSSSMASVCGGSLAMMDAGVPVKDHVAGVAMGLILDGGKF
AVLTDILGDEDHLGDMDFKVAGTENGVTALQMDIKIQGITKEIMQVALAQAREGRLHILG
KMKEALDGSRGELSAFAPRMLTIKINPEKIRDVIGKGGATIRALTEETGTQIDISDDGTI
VIASVDEAQAKEAQRRIVELTADVEVGQVYDGSVLRLLDFGAIVQVLPGRDGLLHISEIA
NYRIANINDVLKVGQQVRVKVIEADDKGRLRLSIKAIGGIEQQQAAAEAAPQAEPQAE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaagtgactaaatcgttccagtacggccagcacacggtcgtcctggaaacc
ggcgaaatcgctcgccaggcctccggcgccgttgtggtgtcgatcgaggacaccgtcgtc
ctggccactgtcgtggcctccaagaaggccaagccgggtcagacgttcttcccgttgacc
gtcgactacatcgaaaagacctacgccgccggccgcatcccgggtggcttcttcaagcgt
gaaggcaagccgtccgagaaggaaacgctgacctcgcgcctgattgaccgtcccctgcgt
ccgctgttccccgaagacttctacaacgaagtccaggtggtcatccacacgctgtcggtc
aatcccgaaatcgatccggacatcgccgccatgatcggcgcgtcggccgccctggccatc
tccggcatccccttcaacggcccgatcggcgccgcccgcgtgggttacatcgatggccag
tacgccatcaacccgaccgcgtcgcaattgaagtcgtcgaagctggacctggtggtcgcc
ggcaccgaaaacgccgtgctgatggtggagtcggaagccgaccagctgtccgaggaaatc
atgctgggcggcgtggtctacggccacgagcagatgcaggccgtcatcaacgccatccac
gagctggtcaaggacgccggcaagcccgattgggactggcaagcgcccgccaaggacgag
gccctgatcgccgccgtcacgtcggccgcccaggaaggcctgaacgccgcctaccagatc
cgcgaaaagcaggcccgcaccaccaagctgcgtgaagtctacgccgacgtgtcggccaag
ctgaacgccgccgccgccgagaagggcgagccggcgccggacgccgtcaccgtcgacaac
atcctgttctcgctggaatcggccatcgtccgcggccagatcctgaacggcgaaccgcgt
atcgatggtcgcgacacccgcaccgtgcgtcccatcagcgtgcgcctgggcgtgctgccg
cgcgcgcacggcagcgccctgttcacccgcggtgaaacccaggcgctggtcgtggccacg
ctgggcaccaagcaggacgagcagatcattgacgcgctcatgggcgagtaccgcgaccgc
ttcatgctgcactacaacatgcctccgttcgccaccggcgaaaccggccgcatcggcgtg
cccaagcgccgcgaaatcggccacggccgcctggccaagcgcgcgctgatcccgctgctg
ccggccccggaagacttccagtacaccatccgcatcgtctcggaaatcaccgagtccaac
ggctcgtcgtcgatggcttcggtctgcggcggctcgctggccatgatggatgccggcgtg
ccggtcaaggatcacgtggccggcgtggccatgggcctgatcctggacggcggcaagttc
gccgtgctgaccgacatcctgggtgacgaagatcacctgggcgacatggacttcaaggtc
gcaggcaccgaaaacggcgtcaccgcgctgcagatggacatcaagatccagggcatcacc
aaggaaatcatgcaagtggcgctggcgcaagcccgcgaaggccgcctgcacatcctgggc
aagatgaaggaagcgctggacggttcgcgcggcgagctgtcggctttcgccccgcgcatg
ctgaccatcaagatcaaccccgagaagatccgcgacgtgatcggcaagggcggcgccacc
atccgcgcgctgaccgaggaaaccggcacccagatcgacatctccgacgacggcacgatc
gtgatcgccagcgtcgacgaagcgcaggccaaggaagcccagcgccgcatcgtcgagctg
accgccgacgtcgaagtgggccaggtctacgacggctcggtcctgcgcctgctggacttc
ggcgccatcgtgcaagtgctgccgggccgcgacggcctgctgcacatctcggaaatcgcc
aactaccgcatcgccaacatcaacgatgtgctgaaggtcggccagcaagtccgcgtcaag
gtcatcgaggccgacgacaagggccgcctgcgcctgtccatcaaggcgatcggcggcatc
gagcagcagcaggccgctgccgaagccgccccgcaagcggaaccgcaagccgaataa
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