Achromobacter xylosoxidans NBRC 15126 = ATCC 27061: AX27061_1892
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Entry
AX27061_1892 CDS
T02964
Name
(GenBank) hypothetical protein
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
axn
Achromobacter xylosoxidans NBRC 15126 = ATCC 27061
Brite
KEGG Orthology (KO) [BR:
axn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
axn03019
]
AX27061_1892
Enzymes [BR:
axn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AX27061_1892
Messenger RNA biogenesis [BR:
axn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AX27061_1892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
NACHT
T2SSE
nSTAND3
HA2_N
SLFN-g3_helicase
AAA_25
ResIII
AAA_30
SRP54
AAA_16
TsaE
Motif
Other DBs
NCBI-ProteinID:
AHC46357
LinkDB
All DBs
Position
2069765..2073706
Genome browser
AA seq
1313 aa
AA seq
DB search
MPESSRPRPPVPADGPTRGPRKPRADAAAPAARQAPRPERPIPAVTYPEDLPVSARRQEI
ARAIAGHQVVIVSGETGSGKTTQLPKICLELGRGRQKMIGHTQPRRLAATSVAKRIAEEL
NTPMGEVVGYQVRFNDRTGPNASIKLMTDGILLAESQRDPLLRRYDTIIIDEAHERSLNI
DFLLGYLKQLLPRRPDLKVIITSATIDAERFARHFAASEDKPAPVIEVSGRLYPVEVRYR
PVREEAAEDEAAPARPGRDRERMSGDEERDLIDAIVDAVDECARHGPGDVLVFLPGEREI
RESAEALRKRHPAGTEVLPLYARLSQAEQEQIFHPRGNARRIVLATNVAETSLTVPGIRF
VVDSGLARVKRYSWRNKVEQLRIEPVSRASANQRAGRCGRVGPGLCIRLFDEADFNARAA
FTDPEVLRSSLASVILRMKSLKLDDIEQFPFVEAPPGRAVADGYHLLQELGAIELAAADD
GDDASRTGASFVLTQTGHELAKLPVDPRIGRMILAAREHQCLAEMLIIASALSVQDARDR
PMQEREAAEAAHAKFADDKSEFISFLKLWRWYGEQVQHKASQRKLVGLLRQNFLSPIRLR
EWHDVHTQLAALVGEQGWRVNQVEATYEQLHMALLSGLLGNIGFKSDEGGHYQGAREIRF
HIHPGSRLVKKAGRWIVAAELVETTRLYARCVARIDPVWLEKVGAHLIRKNWSDPRWEKK
AGQVVANERATLYGLTIYSGRRIQYGRVHPREARELFIRQALVPGEIDTRLAFVAHNRKL
IAGIEKLEHQTRRPDILVDDELIYAFYDRQLPADISQTATLEKWVNGLDKAEAAKLLLTR
DELMRHEAAGVTTDVFPKKVEWQGVSMALDYHFEPGSPRDGVTLAVPLFALNQIDPARCE
WLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAAGFYDRWFERLGDPQTGLVDALIADMW
DQVQVRPAAADFKLETLPAHLFMNFRVVDEHGRMLAAGRNLAQLRAEFGKQAQATFQQLA
ASDTQVAQALAHENLTAWTFGPLPEIMEIKRRGQSVIGYPALVDRGAHCDLDVFDDPDEA
RKAHRAGLLKLFRLGLREQVKFLEKNLADLTRISMLYMTLGTQEELRDQIIDCALGQACL
AEPWPVNEQQFEARRAEGKGRLGLLAQEVARLAGTILTEYATLQRKLPQAKPHAAAYADL
QQQLGALMPKWFIRDTPYPQLSHFPRYLKAAVARIDKLRADPGRDAKLVAEMAPLVTQYQ
RARSALKGAPDPRLDEFRWLLEELRVALFAQELRTPMPVSVKRLMKSWESLQR
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgccagaatcttcccgcccgcggccgcccgtgccggccgacgggccgacccggggcccc
cgcaagccgcgtgccgatgccgcggccccggcggcccgccaggcgccccgccccgagcgg
cccattcccgccgtgacctaccccgaagacctgcccgtcagcgcgcggcgccaggaaatc
gcgcgcgccatcgccggccatcaggtggtcatcgtcagcggcgagaccggctcgggcaag
accacccaattgcccaagatctgcctggaactgggccgcggccgccagaagatgatcggc
cacacccagccgcggcggctggccgccacttcggtggccaagcgcatcgccgaggaactg
aacacgccgatgggcgaggtggtgggctaccaggtgcgtttcaacgaccgcaccggcccc
aatgcgtcgatcaagctgatgaccgacggcatcctgctggccgagtcgcagcgcgacccg
ctcctgcgccgctacgacaccatcatcatcgacgaggcgcacgaacgcagcctgaacatc
gacttcctgctgggctatctcaagcagctgctgccgcgccgtcccgacctgaaagtcatc
atcacctcggccaccatcgacgccgagcgcttcgcccgccatttcgccgcgtccgaggac
aagccggcgccggtgatcgaggtctcgggccggttgtatccggtcgaggtgcgctaccgt
ccggtgcgcgaggaagccgccgaggacgaggccgcgcccgccaggccgggccgcgaccgc
gagcgcatgtcgggcgacgaggaacgcgacctgatcgacgccatcgtcgacgcggtcgac
gaatgcgcccgccacggccccggcgacgtgctggtgttcctgccgggcgagcgcgagatc
cgcgaatcggccgaagcgctgcgcaagcgccacccggccggcaccgaggtactgccgctg
tacgcgcgcctgtcgcaggccgagcaggaacagatcttccatccgcgcggcaacgcgcgc
cgcatcgtgctggccaccaacgtggcggaaacctcgctgacggtgcccggcatccgcttc
gtggtcgacagcggcctggcgcgcgtcaagcgctattcctggcgcaacaaggtcgagcag
ctgcgcatcgagccggtcagccgcgcctcggccaaccagcgcgccggccgttgcggccgg
gtcggcccgggcctttgcatccggctctttgatgaagccgacttcaacgcccgcgccgcc
ttcaccgaccccgaggtgctgcgttcctcgctggcgtccgtgatcctgcggatgaagtcg
ctcaagctggacgacatcgagcagttcccgttcgtcgaggccccgcccgggcgcgcggtg
gccgacggctaccacctgctgcaggaactgggcgcgatcgaactggcggccgccgatgat
ggcgacgacgccagccgcaccggcgcctcgttcgtcctgacccagaccggccacgaattg
gccaagctgccggtggacccgcgcatcggccgcatgatcctggccgcgcgcgagcaccag
tgcctggccgagatgctgatcatcgcttcggcgctgtcggtgcaggacgcgcgcgaccgg
cccatgcaggaacgcgaggcggccgaagccgcgcacgccaagttcgccgacgacaagtcc
gaattcatctccttcctcaagctgtggcgctggtacggcgagcaggtgcagcacaaggcc
tcgcagcgcaagctggtgggcctgctgcggcagaacttcctgtcgcccatccggctgcgc
gaatggcacgacgtccacacccagctggccgccctggtgggcgagcagggctggcgcgtc
aaccaggtcgaggccacctacgaacagctgcacatggcgctgctgtcgggcctgttgggc
aacatcggcttcaagagcgacgagggcggtcactaccagggcgcccgcgagatccgcttc
cacatccatccgggctcgcgcctggtgaagaaggccggccgctggatcgtcgccgccgag
ctggtcgagaccacccgcctgtatgcgcgctgcgtggcgcgcatcgatccggtctggctg
gaaaaggtcggcgcccatttgatccgcaagaactggtcggacccgcgctgggaaaagaag
gccggccaggtggtggccaacgaacgcgccacgctctatggcctgaccatctacagcggc
cgtcgcatccagtacggccgggtccatccgcgcgaggcgcgcgaactgttcatccgccag
gcgctggtgccgggcgagatcgacacgcgcctggccttcgtggcccacaaccgcaagctg
atcgccggcatcgagaaacttgagcatcagacccgtcgccccgacatcctggtcgatgac
gagctgatctacgccttctatgaccgccagctgccggccgacatctcgcagaccgcgacg
cttgaaaagtgggtcaacggcctcgacaaggccgaagccgccaagctgctgctgacgcgc
gacgaactgatgcggcacgaggccgccggcgtcaccaccgacgtcttccccaagaaggtg
gagtggcagggcgtgtcgatggcgctcgattaccacttcgagcctggctcgccgcgcgac
ggcgtgacgctggcggtgccgctgttcgccctgaaccagatcgatccggcgcgctgcgaa
tggctggtgcccggcatgctcaaggagaaggtgcacctgctgctcaagtcgctgccgcag
aagctgcgccgccactgcgtgccgctgcccgactacgccgccggcttctacgaccgctgg
ttcgagcgcctgggcgacccgcagaccggcctggtggacgccctgatcgccgacatgtgg
gaccaggtgcaggtgcgcccggccgccgccgacttcaagctcgagacgctgccggcgcac
ctgttcatgaacttccgcgtggtcgacgagcacggccgcatgctggccgccggccgcaac
ctggcgcagttgcgcgccgagttcggcaagcaggcccaggccaccttccagcagttggcc
gccagcgacacccaggtggcgcaggcgctggcgcacgagaacctgaccgcctggaccttc
ggcccgctgccggagatcatggagatcaagcgccgcggccagtcggtcatcggttacccg
gcgctggtcgaccgcggcgcgcattgcgacctggacgtgttcgacgacccggacgaggcc
cgcaaggcgcaccgcgccggcctgctcaagctgttccggctgggcctgcgcgagcaggtc
aagttcctggaaaagaacctggccgacctgaccaggatcagcatgctctacatgacgctg
ggcacgcaggaagaactgcgcgaccagatcatcgactgcgccttgggccaggcctgcctg
gccgagccctggccggtcaacgagcagcagttcgaggcgcgccgggccgagggcaagggc
cggctgggcctgctggcgcaggaagtggcgcgcctggcgggcacgatcctgaccgaatac
gcgaccctgcagcgcaagctgccgcaggccaagccgcacgccgcggcctatgccgacctg
cagcagcagctgggggcgctgatgcccaagtggttcatccgcgacactccttacccccag
ctgtcgcatttcccgcgctacctgaaggcggcggtggcgcgcatcgacaagctgcgcgcc
gatccgggccgcgatgccaagctggtggccgagatggccccgctcgtgacccagtaccag
cgggcccgctcggccctgaagggggcgcccgacccgcgcctggacgagttccgctggttg
ctggaggagctgcgggtagccctgttcgcgcaggaattgcgcacgccgatgccggtgtcg
gtcaagcgcctgatgaaaagctgggaatccctgcagcgctga
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