Achromobacter xylosoxidans NBRC 15126 = ATCC 27061: AX27061_2747
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Entry
AX27061_2747 CDS
T02964
Name
(GenBank) Pectate lyase precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
axn
Achromobacter xylosoxidans NBRC 15126 = ATCC 27061
Pathway
axn00040
Pentose and glucuronate interconversions
axn01100
Metabolic pathways
axn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
axn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AX27061_2747
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AX27061_2747
Enzymes [BR:
axn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AX27061_2747
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AHC47209
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Position
3005385..3006584
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AA seq
399 aa
AA seq
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MPRALAWLAALAMLYGGAAAANESCASPDERCPFVSALLQQREGYGARATGGLGGRFIEV
TSDQDAGPGTLRAALAQAKKGPTWIRFASDMTIVLESQLRVPSNTTIDGRGRHVALIDDG
LGVYGSRNVILTHLTIDGRLNRLTQAVNIANDSRDVWVDHMDLSRMSDRLLNVKNGSTDV
TISWTKFHNSNKVMLLNNITSKDLFANYERDSIARVTLHHNYFFNTVQRNPRGQFGTFHL
FNNLLENWDFYGMSFSLEAKALVEGNIFNNDSKRECVEPEFFPTVEGVKVNYCRYIPMAA
KRSALDNGASDEGAYQQLKAVHGYTRDFKAFLRLKDNLYLGDAKPVLQDYRPEAAPTPPY
CYGYEKPSAELAERIRKHAGNTSGDTPLPASRVGTNCAG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
ttgccgcgcgcgctggcctggctggcggcgctggccatgctgtacggcggcgcggcggcc
gccaacgagtcctgcgccagcccggacgagcgttgtccattcgtgtccgcgctgctgcag
cagcgggagggctatggcgcccgcgccacgggcggcctgggcggccggttcatcgaggtc
acatccgaccaggatgccggaccgggcacgctgcgcgccgcgctggcgcaggccaagaag
ggacccacctggatccgtttcgcctccgacatgaccatcgtgctggaatcgcaactgcgg
gtgccgtcgaacacgaccatcgatggccgcggcaggcacgtggccctgatcgacgacggg
ctgggcgtgtatggcagccggaacgtgatcctgacgcacctgaccatcgatggccgcctg
aaccgcctgacgcaggcggtgaacatcgccaacgacagccgcgatgtctgggtggaccac
atggatctgtcgcgcatgtccgaccgcctgctcaacgtgaagaacggctcgaccgacgtg
acaatttcctggaccaagttccacaactcgaacaaggtcatgctgctcaacaacatcacc
tcgaaggacctgttcgcgaactacgaacgtgattccatcgcgcgcgtgacgctgcaccac
aattacttcttcaacacggtgcagcgcaaccccaggggccagttcggcaccttccacctg
ttcaacaatctgctggagaattgggatttctacggcatgagtttcagcctggaggccaag
gcgctggtcgaaggcaatatcttcaacaacgattcgaagcgcgagtgcgtggagccggaa
ttcttccccacggtggaaggcgtcaaggtgaattactgccgctacattcccatggccgcc
aagcgcagcgcgctggacaacggcgcctccgacgagggcgcctaccagcaattgaaggcc
gtgcacggctatacgcgcgacttcaaggcattcctgcgcctgaaagacaacctctacctg
ggggacgccaagccggtgctgcaggactatcgcccggaagccgcgccgacgccgccctat
tgctatgggtatgagaagccctcggccgagctggcggagcgcatccgcaagcacgcgggg
aacaccagcggcgataccccgctgcccgcatcacgggtcgggacgaactgcgcagggtga
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