Achromobacter xylosoxidans NBRC 15126 = ATCC 27061: AX27061_5231
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Entry
AX27061_5231 CDS
T02964
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
axn
Achromobacter xylosoxidans NBRC 15126 = ATCC 27061
Pathway
axn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
axn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AX27061_5231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
axn03021
]
AX27061_5231
Transcription machinery [BR:
axn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AX27061_5231
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
MerR
Sigma70_ECF
HTH_11
HTH_3
CP_ATPgrasp_1
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AHC49686
LinkDB
All DBs
Position
complement(5754531..5755037)
Genome browser
AA seq
168 aa
AA seq
DB search
MDTSDYAIPPSVETLYGDHHSWLQAWLRRRLGNAADAADLAQDAFVRLLTTPRRFGSLPE
ARVYLRTMAGGLCVDLWRRRRIEQAWLDTLTAQPEALAPSAEHQAIVLEALQEIDRLLRS
LPVKAAHAFVMASGCGMSETEVAAELGVSTRMVRKYIAQAMLHCLKTL
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
ttggatacctccgactacgcgatcccgcccagcgtggaaaccctttacggcgaccatcat
tcctggctccaggcctggctgcgccgtcggctcggcaatgccgccgacgcggccgacctg
gcgcaggacgcgttcgtgcggctcctgaccacgccgcgccgcttcggcagcctgcctgaa
gcgcgcgtctacctgcgcaccatggccggcggcctgtgtgtcgacctgtggcgccgccgg
cgtatcgaacaggcctggctcgacacgctcaccgcccagcccgaggcgctggcgccgtcg
gccgaacatcaggcgatcgtgctggaggcgctgcaagagatcgaccgcctgttgcgcagc
ctgcccgtgaaggcggctcacgccttcgtcatggcctccggttgcggcatgagcgaaacg
gaagtggcggcggagctgggcgtcagcacccgcatggtgcgcaagtacatcgcgcaggcc
atgctgcattgcctgaagacgctttga
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