Achromobacter xylosoxidans NBRC 15126 = ATCC 27061: AX27061_5339
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Entry
AX27061_5339 CDS
T02964
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
axn
Achromobacter xylosoxidans NBRC 15126 = ATCC 27061
Pathway
axn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
axn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AX27061_5339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
axn03400
]
AX27061_5339
Enzymes [BR:
axn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AX27061_5339
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AX27061_5339
DNA repair and recombination proteins [BR:
axn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AX27061_5339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
C1_2
Auto_anti-p27
NFACT_N
DUF5817
RNHCP
Motif
Other DBs
NCBI-ProteinID:
AHC49794
LinkDB
All DBs
Position
5875142..5875873
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AA seq
243 aa
AA seq
DB search
MRWPIPAELPALVGGHTVRECGRRGKYLLLRFDHGTQIVHLGMSGSLRSVAPGEFLRKHD
HVEWIFDQAVLRLHDPRRFGAVLWHPDADGPVENHPLLAKLGIEPFDPRFDGAWLHHHFK
NHGAAIKQVLLAGMAVVGVGNIYASESLFRARINPKTPANKLSRARCDRLADMVRATLAD
ALTSGGSTLRDYVGATGEPGAYFEIHAAVYERAGQPCRVCGTPIKRIVQGQRATYYCPKC
QKT
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggcccatcccggccgaactgcccgccctggttggcggccacacggtgcgcgaa
tgcggccgccgcggcaagtacctgctgctgcgcttcgaccacggcacccagatcgtgcac
ctgggcatgtccggttcgctgcgcagcgtggcgcccggtgaattcctgcgcaagcacgac
cacgtcgaatggatcttcgaccaggcggtgctgcgcctgcacgacccgcgccgcttcggc
gcggtgttgtggcatcccgatgcggacggaccggtcgaaaaccaccccctgctggccaag
ctcggcatcgagccattcgacccgcgcttcgacggcgcctggctgcaccatcacttcaag
aaccacggcgccgcgatcaagcaagtgctgctggccggcatggcggtggtgggtgtgggc
aatatctatgcctccgaaagcctgttccgcgcgcgcatcaatcccaagaccccggccaac
aagctgtcgcgcgcccgctgcgaccgcctggcggacatggtgcgcgccaccctggccgac
gccctgacctccggcggcagcaccctgcgcgactacgtcggcgccaccggcgagccgggc
gcctatttcgagatccacgccgcggtctatgaacgcgccggccagccctgccgggtctgc
ggcacgccgatcaagcgcatcgtccagggccagcgggccacctactactgcccgaagtgc
cagaagacctga
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integrated database retrieval system
