Achromobacter xylosoxidans NBRC 15126 = ATCC 27061: AX27061_5978
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Entry
AX27061_5978 CDS
T02964
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
axn
Achromobacter xylosoxidans NBRC 15126 = ATCC 27061
Pathway
axn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
axn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AX27061_5978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
axn03021
]
AX27061_5978
03400 DNA repair and recombination proteins [BR:
axn03400
]
AX27061_5978
Enzymes [BR:
axn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AX27061_5978
Transcription machinery [BR:
axn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AX27061_5978
DNA repair and recombination proteins [BR:
axn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AX27061_5978
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
AAA_lid_4
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AHC50430
LinkDB
All DBs
Position
complement(6578953..6579939)
Genome browser
AA seq
328 aa
AA seq
DB search
MSTQGFLKPRSIEVEPVGTHHAKIVMEPFERGYGHTLGNALRRILLSSMTGYAPTEVQMT
GVVHEYSTIPGVREDVVDILLNLKGVVFKLHNRDEVTLVLRKTGAGTVLASDIELPHDVE
IINPGHAICNLTDAGKLEMQIKVEKGRGYVPGNVRALSEDRTHTIGRIVLDASFSPVRRV
SYAVESARVEQRTDLDKLVLDIETNGVISPEEAVRQSARILMDQISVFAALEGAGDSYEA
PVRGTPQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLN
EIKEVLAARGLTLGMKLENWPPLGLERP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcaaggtttcctgaagccgcgctccattgaagtcgaaccggtcggcacccac
catgccaagatcgtgatggagccgttcgagcgcggctacggccatacgctgggcaacgcc
ctgcgccgcatcctgctgtcttcgatgaccggctacgcgccgaccgaagtccagatgacg
ggcgtggtgcacgaatactcgaccatcccgggcgttcgcgaagatgtcgtcgacatcctg
ctgaacctgaagggcgtggtcttcaagctgcacaaccgtgacgaagtcaccctggtcctg
cgcaagaccggcgccggcaccgtgctggccagcgacatcgagctgccgcacgacgtcgag
atcatcaaccccggccacgccatctgcaacctgacggacgcgggcaagctggaaatgcag
atcaaggtcgaaaagggccgtggctacgtgccgggcaacgtgcgcgcgctgtcggaagac
cgcacccacaccatcggccgcatcgtcctggacgcctcgttcagcccggtccgccgcgtc
agctacgcggttgaaagcgcccgcgtggaacagcgcaccgacctggacaagctggtgctg
gacatcgaaaccaacggcgtcatctcgcccgaggaagcggtgcgccagtcggcccgcatc
ctgatggaccagatctcggtcttcgccgccctggaaggcgccggcgattcgtacgaagcc
ccggtccgcggcacgccgcagatcgacccggtcctgctgcgtccggtcgacgacctggaa
ctgaccgtgcgttcggccaactgcctgaaggccgaaaacatctactacatcggcgacctg
atccagcgtaccgagaacgaactgctcaagaccccgaacctgggtcgcaagtcgctcaac
gagatcaaggaagtgctggccgcacgcggcctgacgctgggcatgaagctcgaaaactgg
cccccgctgggcctggagcgtccgtaa
DBGET
integrated database retrieval system
