Achromobacter xylosoxidans NH44784-1996: NH44784_003321
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Entry
NH44784_003321 CDS
T02785
Name
(GenBank) 3'-to-5' oligoribonuclease (orn
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
axo
Achromobacter xylosoxidans NH44784-1996
Pathway
axo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
axo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NH44784_003321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
axo03019
]
NH44784_003321
03009 Ribosome biogenesis [BR:
axo03009
]
NH44784_003321
Messenger RNA biogenesis [BR:
axo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NH44784_003321
Ribosome biogenesis [BR:
axo03009
]
Eukaryotic type
Pre-60S particles
RNases
NH44784_003321
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
CCH04316
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All DBs
Position
complement(318474..319013)
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AA seq
179 aa
AA seq
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MNENRLVWLDMEMTGLDPEKERIIEVAVVVTEADLTVVAEGPVLVVHQSDSLLDAMDNWN
KSTHGKSGLIDKVRASTISEAQAEDTLLAFLAQHVPAGKSPLCGNTISQDRRFMFAYMPR
LEQFFHYRNLDVSTLKELARRWAPAVYKGFEKKSRHEALADIYESIDELKYYREHFLKV
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaaaatcgcctggtttggctggacatggaaatgaccggcctggaccctgaaaaa
gaacgcatcatcgaggtcgccgtggtggtcaccgaggccgatctgaccgtggtcgccgaa
ggccccgtgctggtggtgcaccagtccgacagcctgctcgacgccatggacaactggaac
aaatccacccacggcaaaagtggcctgatcgacaaggtgcgcgcctcgacgatttccgaa
gcgcaggcagaggatacgctgttggcgtttctcgcgcagcacgtgccggctggcaagtcg
ccgctgtgcggcaacaccatcagccaggaccgccggttcatgtttgcttacatgccgcgc
ctggaacagttctttcattaccgcaacctggacgtcagcacgctcaaggaactggcgcgc
cgctgggcgccggccgtgtacaaggggttcgagaagaagagccgccacgaggcgctggcc
gacatctatgaatcgatcgacgaactgaagtactaccgcgagcacttcctgaaggtgtag
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