Achromobacter xylosoxidans NH44784-1996: NH44784_004171
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Entry
NH44784_004171 CDS
T02785
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
axo
Achromobacter xylosoxidans NH44784-1996
Brite
KEGG Orthology (KO) [BR:
axo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
axo03009
]
NH44784_004171
Enzymes [BR:
axo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
NH44784_004171
Ribosome biogenesis [BR:
axo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NH44784_004171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TruB_N
Motif
Other DBs
NCBI-ProteinID:
CCH04401
LinkDB
All DBs
Position
complement(423463..424473)
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AA seq
336 aa
AA seq
DB search
MSDTATPADLVSDDELLGFPGESSGENQRGEPQLVTVPSGTRADRLDKVLAGLLPDHSRS
RLQGWIEAGNVQVNGAPGKVRQTVGPGDEIAVWAQPAPEALAFAPEAIDFPVVDESPDWI
VVNKPAGLVVHPGAGNWSGTLLNGLLHRYPELAQVARAGIVHRLDKDTSGLMVVARNEIA
QTHLVRQLQARSMGREYVALAHGWLAAAGKVDRPIGRDPRVPVRMSVERPVAPKPAVTHY
APARRGQIDPGGRATEVICRLETGRTHQIRVHLASLGHPLLADTIYGGKNIAGAQRQMLH
ARALHFDDPGGRGEVQFAAPVPADMTLVQEAIAWNA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatacagccacccccgcagatctcgtttccgacgatgaactcctgggctttccc
ggcgaatcctccggtgaaaaccagcggggcgagccgcaacttgtaacggtgccgtcgggc
acgcgcgccgataggctcgacaaggtgctggcggggttgttgccggatcattcccgcagc
cgcctgcaaggctggatcgaggctggcaacgtacaggtgaatggcgcgcctggcaaggtc
cgccagaccgtcggcccgggcgacgagatcgccgtctgggcccagcccgcgccggaagcc
ctggcgttcgcgccggaggcgatcgattttcccgtggtggatgaaagccccgactggatc
gtggtgaacaaaccggccggcctggtggtgcaccctggcgccggcaactggagcggcacg
ctgctcaacggcctgctgcaccggtatccggaactggcccaggtggcgcgcgccggcatc
gttcaccggctggacaaggatacgtccggcctgatggtggtggcgcgcaacgaaatcgcc
cagacgcacctggtgcgccagctgcaggcgcgcagcatgggccgcgagtacgtggcgctg
gcgcatggctggctggccgccgccggcaaggtcgaccgcccgatcgggcgcgatccgcgg
gtgccggtgcgcatgagcgtcgaacggccggtggcgcccaagccggccgtcacccactac
gcgcccgcgcgacgcggccagatcgatcccggcggccgcgccaccgaagtgatctgtcgc
ctggaaaccggccgcacccaccagatccgcgtgcacctggccagcctcggccatccgctg
ctggcggatacgatctacggcggcaagaacatcgcgggcgcgcagcggcagatgctgcat
gcccgcgccctgcatttcgacgatccgggcgggcgtggcgaggtccagttcgccgccccc
gtgccggcggacatgaccctggtccaggaagcgatcgcatggaacgcgtga
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