Achromobacter xylosoxidans NH44784-1996: NH44784_015531
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Entry
NH44784_015531 CDS
T02785
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
axo
Achromobacter xylosoxidans NH44784-1996
Brite
KEGG Orthology (KO) [BR:
axo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
axo03016
]
NH44784_015531
Enzymes [BR:
axo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NH44784_015531
Transfer RNA biogenesis [BR:
axo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NH44784_015531
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
DUF7691
RNase_P-MRP_p29
Motif
Other DBs
NCBI-ProteinID:
CCH05525
LinkDB
All DBs
Position
1638547..1640454
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AA seq
635 aa
AA seq
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MYVFYEDDGSFKAGHILSETDASLQVESESGKRSKIKRANTLFNFAAPEPAALMAQAAAL
AETLDLQFLWECAPQEEFESPALAADYFGHAPTPVEQAALLMRLHGAPAYFHRRGKGSYR
PAPPDILAAALAALEKKQRQAEQQQEWVDEMAAGRLPEPIAQVAESLLIRPDKNSQQWKA
LDAACARLGKSPDRLLLELGAWPHALALHKRRFLAVNFPRGLAFPELELPPIDRDLPLSD
AEIYSVDDVTTTEIDDALSVSTLPDGNLRVGIHVAAPGLTVTRDSEFDKLARARLSTVYM
PGDKIPMQPDNVIKAFSLDAGREVPVLSLYVVANPETGEIIESDTRLERVVVRENLRHNM
LDAQVTEDSLNDTSTDLPYGHWLRPLWKLAQALSAQRENVRGKPENNSRVEYSFYLDGDP
DDPDTPVRLVPRQRNAPLDRMVAEYMILANNLWGGLLNQHGVPGIYRSQQAGRVRMSTQA
LPHEAIGVPQYAWSTSPLRRYVDLVNQWQLIAAVEHGVSARLVAPFKPRDADLFAIIGAF
DAQYAAWAEFQSAMERYWCLRWLKQHNITRTVAHVLREDLVRFANCPLVTRIGGMPELER
GTAVEVEILGMDELSLELDCRYVGQVGPAAEEAAA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgttttacgaagacgacggcagcttcaaggccggccatatcctgtccgaaacc
gacgccagcctccaggtggagtcggagtcgggcaagcgcagcaagatcaagcgcgccaat
acgctgttcaatttcgccgcgcccgaacccgccgcgctgatggcccaggcggccgcgctg
gccgaaaccctggacctgcaattcctgtgggaatgcgcgccccaggaggaattcgagtcc
ccggccctggcggccgactatttcggccacgcccccaccccggtcgagcaggccgccctg
ctgatgcgcctgcatggcgcgccagcctatttccaccgccgcggcaagggcagttaccgc
cccgccccgcccgacatcctggccgccgccctggccgcgctggaaaagaaacagcgccag
gccgaacagcagcaggaatgggtggacgagatggccgccggccgcctgcccgagcccatc
gcccaggtcgccgaatcgctgttgatccggcccgacaagaattcgcagcaatggaaggcg
ctggacgccgcctgcgccaggctcggcaagagccccgaccgcctgttgctggaactgggc
gcctggccgcacgccctggcgctgcacaagcgccgcttcctggcggtgaactttccccgg
ggcctggcctttcccgagctggaactgccgccgatcgaccgtgacctgccgctgtcggac
gccgagatctattcggtcgacgacgtcaccaccaccgaaatcgacgacgccctgtcggtt
tccactctgccagacggcaacctgcgcgtcggcatccacgtggccgcgcccggcctgacg
gtgacgcgcgacagcgaattcgacaagctggcgcgcgcccgcttgtccacggtctacatg
ccgggcgacaagatcccgatgcagcccgacaacgtcatcaaggccttctcgctggacgcg
ggccgcgaagtgccggtgctgtcgctgtacgtggtggccaacccggaaaccggcgagatc
atcgaatccgacacgcgcctggagcgcgtggtggtgcgcgagaacctgcgccacaacatg
ctggacgcccaggtcaccgaagacagcctgaacgacacctccactgacctgccctacggc
cactggctgcgcccgctgtggaaactggcgcaggccttgtcggcgcagcgcgagaacgtg
cgcggcaagcccgagaacaattcgcgggtggagtacagcttctacctggacggcgacccc
gacgatcccgacaccccggtgcgcctggtgccgcgccagcgcaacgcgccgctggaccgg
atggttgccgagtacatgatcctggccaataacctgtggggcggcctgctgaaccagcat
ggcgtgccgggcatctaccgctcgcaacaggccggccgtgtgcgcatgagcacccaggcg
ctgccgcacgaggccatcggcgtgccgcagtacgcctggagcacgtcgccgctgcgccgc
tacgtcgacctggtgaaccaatggcagctgatcgccgccgtcgagcacggcgtctcggcg
cgcctggtggctcccttcaagccgcgcgacgcggacctgttcgcgatcatcggcgcgttc
gacgcgcagtacgcggcctgggccgagttccagagcgcgatggagcgctactggtgcctg
cgctggctcaagcagcacaacatcacccgcacggtcgcccacgtgctgcgcgaagacctg
gtgcgcttcgccaactgcccgctcgtcacccggatcggggggatgcccgagctggagcgc
gggacggcggtggaggtggagatcctggggatggatgagttgtcgctggagctggattgc
cggtatgtggggcaggtggggccggcggctgaagaggctgctgcctga
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