Achromobacter xylosoxidans NH44784-1996: NH44784_018291
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Entry
NH44784_018291 CDS
T02785
Name
(GenBank) Sigma54 specific transcriptional regulator with GAF sensor, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
axo
Achromobacter xylosoxidans NH44784-1996
Brite
KEGG Orthology (KO) [BR:
axo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
axo03000
]
NH44784_018291
Transcription factors [BR:
axo03000
]
Prokaryotic type
Helix-turn-helix
Other families
NH44784_018291
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
Sigma54_activ_2
HTH_8
AAA_lid_14
AAA_5
HTH_30
Mg_chelatase
HTH_23
AAA_3
AAA_2
HTH_28
HTH_29
HTH_Tnp_1
AAA
DUF134
Xre-like-HTH
TsaE
HTH_Tnp_ISL3
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CCH05800
LinkDB
All DBs
Position
complement(1937100..1938992)
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AA seq
630 aa
AA seq
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MATQSRWQSLTHARQLFNQQGVVPGGLVAEPILRSWRRCADLGIDMRGARRAEPMTAAEL
REARQRNEALRRMSEPAMSLLRREGGSDGLVILSDAQGLVLDSDGDIDFAQRASRVALMP
GAPWDEAAAGTNAIGTALVEGRPIVVDGAEHYFEPNRILTCAAVPITDSEGRMLGVLDLS
SPAREVRPDVLALVRAAVDLIEHQLFDAAHEPCAVLRLHADRSGLGTPAEALLAFHGDLL
VGANRRAMQALGLAATALGVYRYADLFDGDLEHAPDAAGRVHARGGAAYHARLRLPRSRA
PVAPPPSLRLPAPPAPSALPAPIARGDTASFDAATLGALARAVHLSDAGVSILLQGETGA
GKEVFARQLHARSRRAAGPFVAVNCAALPESLIESELFGYEDGAFTGARRQGSKGLLRQA
HGGVLFLDEIGDMPLALQSRLLRVLQSREVSPLGAARPVPVDFTLVCATHRPLAHEGADA
PVRADLYFRIAEYTVTLAPLRQRADLRELLRAQWAAQGAGPVLPAGIEETLVRYAWPGNY
RQLAAVLRTLHVLAGASGVVEHDMLPADIRGAPAQPPAPPVASLQAMADDAIRAALAAHG
GNVSAAARALGVHRSTLYRRAAALGLARPR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggccactcaatcccgttggcagtcgctgacgcacgcgcgccagctgttcaaccagcaa
ggcgtcgtgcctggcgggctggtcgccgagcccatcctgcgctcctggcgccgctgcgcc
gacctgggtatcgacatgcgcggcgcgcgccgcgcggaacccatgaccgccgccgaattg
cgcgaggcgcgccagcgcaatgaagccttgcggcggatgtccgagccggccatgtccttg
ctgcgccgcgaaggcggcagcgacgggctggtgatcctgtcggatgcgcaaggcctggtg
ctggacagcgacggcgacatcgatttcgcgcagcgcgcctcgcgggtcgccctgatgccc
ggcgcgccgtgggacgaggcggccgccggcaccaacgccatcggcaccgcgctggtggaa
ggccggcccatcgtcgtcgacggcgccgaacactacttcgagccgaaccgcatcctgacc
tgcgcggcggtgcccatcaccgacagcgaaggccgcatgctgggcgtgctggacctgtcc
agccccgcgcgcgaagtgcggccggacgtgctggcgctggtgcgcgcggcggtcgacctg
attgaacaccagctgttcgatgccgcccatgagccctgcgccgtgctgcgcctgcacgcc
gaccggtccgggctgggcacgccggccgaagccctgctggcctttcatggcgacctgctg
gtgggcgccaaccgtcgcgccatgcaggcgctgggcctggcggccacggcgctgggcgtc
taccgctacgccgacctgttcgacggcgacctggaacatgcgcccgacgcggcggggcgc
gtgcatgcccgtggcggcgctgcctaccacgcgcggctgcgcctgccccgttctcgcgcg
ccggtcgcgccgccgccgtcgctgcgcctgccggccccgccggccccatcggcgttaccg
gcgccgatcgcgcgcggtgataccgccagcttcgacgccgccaccttgggcgcgctggcg
cgggcggtgcacctgtcggatgcgggcgtgtcgatcctgttgcagggcgagaccggcgcc
ggcaaggaggtcttcgcgcgccagctgcatgcgcgcagccgccgcgccgccggccctttc
gtggcggtcaattgcgccgcgctgcccgaaagcctgatcgaatcggaattgttcggctac
gaggacggcgccttcaccggcgcgcgccgccagggcagcaagggcctgctgcggcaggcg
cacggcggcgtgctgttcctggacgagatcggcgacatgccgctggcgctgcagtcgcgc
ctgctgcgcgtgctgcaatcgcgcgaggtgtcgccgctgggcgcggcccggccggtgccg
gtggatttcaccttggtgtgcgccacccatcggccgctggcgcatgaaggcgcggatgcc
ccggtacgcgccgacctgtatttccgcattgccgaatacaccgtgaccctggcgccgctg
cgccaacgcgccgacctgcgcgagttgctacgcgcgcaatgggccgcgcagggcgcggga
ccggtgttgccggccgggatcgaggaaacgctggtgcgctatgcctggccgggcaactat
cggcagctggcggcggtgctgcgcaccttgcatgtgctggcgggcgcgtcaggcgtggtc
gaacacgacatgctgccggcggacatccgtggcgcacccgcacagccgcccgcgccgccg
gtggccagcctgcaggcgatggccgacgacgcgatccgcgcggcgctggccgcgcacggg
ggcaatgtcagcgccgcggcgcgcgcgctcggcgtgcatcgcagcaccttgtaccggcgc
gcggcggcgctggggctggcgcgtccacgctga
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