Achromobacter xylosoxidans NH44784-1996: NH44784_019781
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Entry
NH44784_019781 CDS
T02785
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
axo
Achromobacter xylosoxidans NH44784-1996
Brite
KEGG Orthology (KO) [BR:
axo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
axo03021
]
NH44784_019781
Transcription machinery [BR:
axo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NH44784_019781
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_PafC
HTH_AsnC-type
HTH_24
Motif
Other DBs
NCBI-ProteinID:
CCH05949
LinkDB
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Position
complement(2108134..2109018)
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AA seq
294 aa
AA seq
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MKQPSTSLATSGNALALAIANPGALGTIDAYISAVNRLPVLSAERETELGRRLRDSEDLG
AARELVLSHLRLVVSVARQYLGYGLPHADLIQEGNVGLMKAVKRFDPERGVRLVSFAVHW
IKAEIHEYIIRNWRLVKVATTKAQRKLFFNLRSMRPDGQTLDPEQVDHIARELNVRREDV
SEMEVRLSGRDMSLENQDDDDDSYAPIAYLSDEGRQEPTRVLERAARDQLQSSGLSSALE
ALDPRSRRIVEARWLQDDGGATLHELAQEFGVSAERIRQIEAAALKKMRGNLAA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaacccagtacctcgttggccacgtccggcaacgccctggcgttggccatcgcc
aatccgggcgcactcggcacgatcgatgcctacatctcggccgtgaaccgcctgccggtc
ctgtcggccgaacgcgaaaccgaacttggccgtcgcctgcgcgacagcgaagacctgggc
gccgcgcgcgagctggtgctgtcgcacctgcgcttggtggtgtcggtggcgcgccagtac
ctgggttatggcttgccccacgccgacctgatccaggaaggcaatgtcggcctgatgaag
gccgtcaagcgtttcgaccccgagcgcggcgtgcgcctggtgtcgttcgccgtgcactgg
atcaaggccgagatccacgaatacatcatccgcaactggcgcctggtaaaggtggccacc
accaaggcccagcgcaagctgttcttcaacctgcgcagcatgcgcccggacggacagacg
ctggaccccgagcaggtcgatcacatcgcccgcgaactgaacgtgcgccgggaagatgtc
agcgaaatggaagtgcgcctgtcgggccgcgacatgtcgctcgagaaccaggacgacgat
gacgacagctacgcgcctatcgcctacctgtccgacgaaggccgccaggagccgacccgt
gtgctggaacgcgccgctcgcgaccagttgcagagctcggggctgtcgagcgcgctggaa
gcgctggatccgcgttcgcgtcgtattgtcgaagcccgctggctgcaggacgacggcggc
gccacgttgcacgaactggcgcaggaattcggcgtgtcggccgaacgcatccgccagatc
gaggccgcggcgttgaagaagatgcgcggcaatctggctgcctga
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