Achromobacter xylosoxidans NH44784-1996: NH44784_020551
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Entry
NH44784_020551 CDS
T02785
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
axo
Achromobacter xylosoxidans NH44784-1996
Pathway
axo02020
Two-component system
axo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
axo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NH44784_020551
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NH44784_020551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
axo03021
]
NH44784_020551
Transcription machinery [BR:
axo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NH44784_020551
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
K-cyclin_vir_C
Motif
Other DBs
NCBI-ProteinID:
CCH06024
LinkDB
All DBs
Position
complement(2184463..2185890)
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AA seq
475 aa
AA seq
DB search
MTRPILELRPGQHLTLTPQLQQSIRLLQLSTLELEAEISQVLADNPLLERDDEPASVETQ
AESERESSVQDDEPAPERDTPVEEMPGSGGVYPDDDSSLPEAARPDTLREHLLGQLVLTR
AAPRDAALAALLIDELDENGYLGSPLEEILGWLPAEMEPDLDELRAALSLLQSFDPAGIG
ARDMSECLLLQLRSPDTARLPEAADPKALACARLVCAQHLALLATGNHARLCAAVGCDEA
TLRAAHALILRLEPRPGRAWTVPAADYAVPDVIVRKTRRGWQVTLNSAAVPRLQINGLYA
QMLANQKESAHAGLQSQLQQAKWMIRNVEQRFDTILRVAQAIVDRQTAFFSQGPAAMRPL
ILKDIAGELGLHESTISRATTQKYMLTPFGTLELKRFFGAGVSTDGGDATSATAVQTFIR
QMVAEENRAKPLSDSQIMEKLADQGIVIARRTVAKYREALRIAPAALRKAQAAAR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtcctattttagaactgcggcccggccagcatctgacgctgacccctcaactg
cagcaatcgatccggttgctgcagctgtccacactcgagctcgaggcggaaatctcgcaa
gtgctcgccgacaatccgttgctggaacgcgacgatgagcctgcctccgtcgagacgcag
gccgaatccgagcgcgagtcgtcggtgcaggacgacgaacccgcgcccgagcgcgacacc
ccggtcgaggaaatgccgggttcgggcggggtctaccccgatgatgattccagcctgccc
gaggccgcccggcccgataccctgcgcgagcacctgctcgggcaactggtgctgacccgc
gccgcgccgcgcgacgccgcgctggcggcgctgctgatcgacgaactggacgagaacggc
tacctgggctcgcccctggaggaaatcctgggctggctgccggccgagatggagccggac
ctggacgagctgcgcgccgcgctgtcgctgctgcaatcgttcgacccggccggcatcggc
gcgcgcgacatgtccgagtgcctgctgttgcaattgcgcagtcccgacacggcccggttg
cccgaggccgcggatcccaaggcgctggcctgcgcccgcctggtctgcgcccagcatctg
gcgctgttggccaccggcaaccatgccaggctgtgcgccgcggtcggttgtgacgaggcc
acgctgcgcgcggcgcacgccctgatcctgcgtctggagccccgtccgggccgcgcctgg
acggtcccggccgccgattacgcggtgcccgacgtcatcgtgcgcaagacgcgccgcggc
tggcaggtgacgctcaacagcgccgccgtgccgcgactgcagatcaacggtttgtatgcg
cagatgttggccaaccagaaggagtcggcccacgccggcttgcagtctcagctgcaacag
gcgaaatggatgatccgcaacgtggagcagcgcttcgacaccatcctgcgagtggcccag
gccattgtcgaccgccagaccgccttcttcagccaggggccggcggccatgcgcccgctc
atcctcaaggacattgccggcgagctgggcctgcatgagtccaccatttcacgcgccacg
acacagaagtacatgctcactcccttcggtacgctggagctcaagcgcttcttcggggcg
ggggtgtcgaccgatggcggcgacgccacatccgccacggcggtgcagactttcatccgc
cagatggtggccgaggagaaccgggccaagccgctgtccgacagccagatcatggaaaaa
ctggccgaccagggcatcgtcatcgcccgcaggacggtcgcgaaataccgcgaggcactg
cggatcgcgccggccgcgctgcgcaaggcgcaggccgcggcgcgatga
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